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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS13970 and LRK55_RS13975 are separated by 234 nucleotides
LRK55_RS13975 and LRK55_RS13980 overlap by 4 nucleotides
LRK55_RS13980 and LRK55_RS13985 are separated by 1 nucleotides
LRK55_RS13985 and LRK55_RS13990 are separated by 70 nucleotides
LRK55_RS13970: LRK55_RS13970 - hypothetical protein, at 3,097,613 to 3,097,891
_RS13970
LRK55_RS13975: LRK55_RS13975 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 3,098,126 to 3,098,953
_RS13975
LRK55_RS13980: LRK55_RS13980 - Spx/MgsR family RNA polymerase-binding regulatory protein, at 3,098,950 to 3,099,306
_RS13980
LRK55_RS13985: LRK55_RS13985 - DUF2165 domain-containing protein, at 3,099,308 to 3,099,805
_RS13985
LRK55_RS13990: LRK55_RS13990 - succinyl-diaminopimelate desuccinylase, at 3,099,876 to 3,101,024
_RS13990
Group
Condition
LRK55
_RS13970
LRK55
_RS13975
LRK55
_RS13980
LRK55
_RS13985
LRK55
_RS13990
stress
R2A with Zinc chloride 2560 uM
-0.5
N.D.
-0.4
N.D.
N.D.
no stress control
no stress control
-0.3
N.D.
-0.5
N.D.
N.D.
pH
R2A_PIPES pH 4.25
-0.1
N.D.
-0.5
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.5
N.D.
-0.1
N.D.
N.D.
stress
R2A with Zinc chloride 2560 uM
-0.0
N.D.
-0.3
N.D.
N.D.
no stress control
no stress control
-0.4
N.D.
+0.1
N.D.
N.D.
no stress control
no stress control
-0.2
N.D.
-0.0
N.D.
N.D.
pH
R2A_PIPES pH 4.25
+0.2
N.D.
-0.4
N.D.
N.D.
pH
R2A_PIPES pH 4.5
-0.1
N.D.
-0.1
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
N.D.
-0.1
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.0
N.D.
-0.2
N.D.
N.D.
pH
R2A_PIPES pH 4.5
+0.1
N.D.
-0.3
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
N.D.
-0.1
N.D.
N.D.
no stress control
no stress control
-0.1
N.D.
+0.0
N.D.
N.D.
no stress control
no stress control
-0.2
N.D.
+0.1
N.D.
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
N.D.
-0.0
N.D.
N.D.
no stress control
no stress control
+0.0
N.D.
+0.0
N.D.
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.0
N.D.
+0.1
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
N.D.
+0.1
N.D.
N.D.
no stress control
no stress control
-0.1
N.D.
+0.3
N.D.
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
N.D.
-0.0
N.D.
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
N.D.
+0.4
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
N.D.
+0.6
N.D.
N.D.
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