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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS13670 and LRK55_RS13675 are separated by 251 nucleotides
LRK55_RS13675 and LRK55_RS13680 overlap by 4 nucleotides
LRK55_RS13680 and LRK55_RS13685 overlap by 4 nucleotides
LRK55_RS13685 and LRK55_RS13690 overlap by 4 nucleotides
LRK55_RS13670: LRK55_RS13670 - hypothetical protein, at 3,035,996 to 3,036,400
_RS13670
LRK55_RS13675: LRK55_RS13675 - GTP 3',8-cyclase MoaA, at 3,036,652 to 3,037,632
_RS13675
LRK55_RS13680: LRK55_RS13680 - bifunctional molybdenum cofactor biosynthesis protein MoaC/MoaB, at 3,037,629 to 3,038,636
_RS13680
LRK55_RS13685: LRK55_RS13685 - molybdopterin molybdotransferase MoeA, at 3,038,633 to 3,039,886
_RS13685
LRK55_RS13690: LRK55_RS13690 - MoaD/ThiS family protein, at 3,039,883 to 3,040,143
_RS13690
Group
Condition
LRK55
_RS13670
LRK55
_RS13675
LRK55
_RS13680
LRK55
_RS13685
LRK55
_RS13690
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
+0.1
+0.3
-0.3
-3.4
no stress control
no stress control
N.D.
+0.3
+0.1
-3.6
-0.1
pH
R2A_PIPES pH 4.5
N.D.
+0.0
+0.4
-0.5
-2.4
stress
R2A with Zinc chloride 2560 uM
N.D.
+0.2
+0.1
-1.1
-1.5
no stress control
no stress control
N.D.
-0.1
+0.0
-1.3
-0.8
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.2
-0.3
-0.2
-1.6
pH
R2A_PIPES pH 4.5
N.D.
+0.0
+0.2
-2.4
+0.1
pH
R2A_PIPES pH 4.25
N.D.
-0.0
+0.4
-0.8
-1.6
no stress control
no stress control
N.D.
-0.4
+0.2
+0.4
-2.1
pH
R2A_PIPES pH 4.25
N.D.
+0.0
+0.1
+0.6
-2.5
no stress control
no stress control
N.D.
-0.0
-0.3
-1.5
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
+0.1
+0.2
-0.2
-1.9
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
-0.1
-0.1
-0.3
-1.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
-0.1
-0.2
-0.6
-0.4
no stress control
no stress control
N.D.
+0.0
+0.1
-0.7
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
+0.1
+0.2
+0.4
-1.5
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
+0.2
-0.3
+0.3
-0.5
no stress control
no stress control
N.D.
-0.2
+0.3
-0.4
+0.1
no stress control
no stress control
N.D.
+0.1
+0.0
-0.6
+0.5
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.3
+0.4
+0.5
-0.5
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.2
+0.3
-0.0
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-0.0
-0.1
-0.0
+0.5
stress
R2A with Zinc chloride 2560 uM
N.D.
-0.3
+0.3
+0.2
+0.3
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