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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS13520 and LRK55_RS13525 are separated by 58 nucleotides
LRK55_RS13525 and LRK55_RS13530 overlap by 4 nucleotides
LRK55_RS13530 and LRK55_RS13535 are separated by 67 nucleotides
LRK55_RS13535 and LRK55_RS13540 are separated by 113 nucleotides
LRK55_RS13520: LRK55_RS13520 - Trm112 family protein, at 3,003,753 to 3,004,022
_RS13520
LRK55_RS13525: LRK55_RS13525 - 5-(carboxyamino)imidazole ribonucleotide mutase, at 3,004,081 to 3,004,584
_RS13525
LRK55_RS13530: LRK55_RS13530 - 5-(carboxyamino)imidazole ribonucleotide synthase, at 3,004,581 to 3,005,735
_RS13530
LRK55_RS13535: LRK55_RS13535 - Fe-Mn family superoxide dismutase, at 3,005,803 to 3,006,396
_RS13535
LRK55_RS13540: LRK55_RS13540 - Grx4 family monothiol glutaredoxin, at 3,006,510 to 3,006,833
_RS13540
Group
Condition
LRK55
_RS13520
LRK55
_RS13525
LRK55
_RS13530
LRK55
_RS13535
LRK55
_RS13540
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
-4.2
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-3.9
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-3.9
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-3.8
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-3.7
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-3.6
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
-3.6
N.D.
N.D.
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
-3.6
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
-3.5
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
-3.5
N.D.
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
-3.5
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
-3.4
N.D.
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
-3.4
N.D.
N.D.
pH
R2A_PIPES pH 4.5
N.D.
N.D.
-3.3
N.D.
N.D.
pH
R2A_PIPES pH 4.25
N.D.
N.D.
-3.3
N.D.
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
-3.2
N.D.
N.D.
pH
R2A_PIPES pH 4.5
N.D.
N.D.
-3.2
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-3.2
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
-3.2
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-2.9
N.D.
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
-2.8
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
-2.8
N.D.
N.D.
pH
R2A_PIPES pH 4.25
N.D.
N.D.
-2.4
N.D.
N.D.
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