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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS13365 and LRK55_RS13370 are separated by 122 nucleotides
LRK55_RS13370 and LRK55_RS13375 are separated by 13 nucleotides
LRK55_RS13375 and LRK55_RS13380 are separated by 10 nucleotides
LRK55_RS13380 and LRK55_RS13385 are separated by 146 nucleotides
LRK55_RS13365: LRK55_RS13365 - flagellar hook-length control protein FliK, at 2,973,099 to 2,974,241
_RS13365
LRK55_RS13370: LRK55_RS13370 - STAS domain-containing protein, at 2,974,364 to 2,974,765
_RS13370
LRK55_RS13375: LRK55_RS13375 - response regulator, at 2,974,779 to 2,975,141
_RS13375
LRK55_RS13380: LRK55_RS13380 - chemotaxis protein CheA, at 2,975,152 to 2,977,143
_RS13380
LRK55_RS13385: LRK55_RS13385 - methyl-accepting chemotaxis protein, at 2,977,290 to 2,979,002
_RS13385
Group
Condition
LRK55
_RS13365
LRK55
_RS13370
LRK55
_RS13375
LRK55
_RS13380
LRK55
_RS13385
no stress control
no stress control
-0.7
N.D.
-0.8
-0.2
-0.3
pH
R2A_PIPES pH 4.25
-0.9
N.D.
-0.8
+0.4
-0.5
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.6
N.D.
-1.1
-0.4
+0.1
stress
R2A with Zinc chloride 2560 uM
-0.8
N.D.
-0.4
-0.3
-0.3
no stress control
no stress control
-0.3
N.D.
-1.0
-0.2
-0.3
no stress control
no stress control
-0.3
N.D.
-0.8
-0.3
-0.3
stress
R2A with Zinc chloride 2560 uM
-0.3
N.D.
-0.4
-0.4
-0.4
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.7
N.D.
-0.7
+0.1
-0.1
pH
R2A_PIPES pH 4.5
-0.6
N.D.
-0.3
-0.1
-0.4
pH
R2A_PIPES pH 4.5
-0.6
N.D.
-0.1
-0.2
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.4
N.D.
+0.1
-0.3
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
N.D.
-0.4
-0.1
-0.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.7
N.D.
+0.1
-0.0
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.7
N.D.
-0.3
+0.0
+0.2
pH
R2A_PIPES pH 4.25
-0.3
N.D.
+0.6
-0.1
-0.9
no stress control
no stress control
-0.1
N.D.
-0.1
-0.2
-0.1
no stress control
no stress control
-0.0
N.D.
-0.0
-0.1
-0.2
no stress control
no stress control
-0.2
N.D.
-0.2
-0.0
+0.0
no stress control
no stress control
+0.0
N.D.
-0.2
-0.0
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.4
N.D.
+0.4
-0.1
+0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.5
N.D.
+0.7
+0.3
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.3
N.D.
+0.9
+0.5
-0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.4
N.D.
+1.0
+0.5
+0.1
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