Fitness for 5 genes in Rhodanobacter denitrificans MT42

Add gene:

Number of genes on each side:  

Top 23 experiments (either direction), sorted by average fitness

Or view all 23 experiments or choose conditions or try the comparative fitness browser

500 ntLRK55_RS13225 and LRK55_RS13230 are separated by 161 nucleotidesLRK55_RS13230 and LRK55_RS13235 are separated by 47 nucleotidesLRK55_RS13235 and LRK55_RS13240 overlap by 11 nucleotidesLRK55_RS13240 and LRK55_RS13245 overlap by 1 nucleotides LRK55_RS13225: LRK55_RS13225 - sigma-54-dependent Fis family transcriptional regulator, at 2,947,332 to 2,948,756 _RS13225 LRK55_RS13230: LRK55_RS13230 - flagellar hook-basal body complex protein FliE, at 2,948,918 to 2,949,244 _RS13230 LRK55_RS13235: LRK55_RS13235 - flagellar basal-body MS-ring/collar protein FliF, at 2,949,292 to 2,950,995 _RS13235 LRK55_RS13240: LRK55_RS13240 - flagellar motor switch protein FliG, at 2,950,985 to 2,952,001 _RS13240 LRK55_RS13245: LRK55_RS13245 - FliH/SctL family protein, at 2,952,001 to 2,952,621 _RS13245
Group Condition LRK55_RS13225 LRK55_RS13230 LRK55_RS13235 LRK55_RS13240 LRK55_RS13245
pH R2A_PIPES pH 4.5 -0.3 N.D. -0.4 -0.2 -0.1
pH R2A_PIPES pH 4.5 -0.1 N.D. -0.3 -0.3 -0.3
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.2 N.D. -0.2 -0.0 -0.1
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.0 N.D. -0.1 -0.3 -0.0
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.0 N.D. -0.3 +0.0 +0.0
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.2 N.D. -0.4 -0.1 +0.2
no stress control no stress control +0.2 N.D. -0.1 +0.0 +0.1
no stress control no stress control +0.1 N.D. +0.0 -0.1 +0.2
stress R2A with Zinc chloride 2560 uM -0.1 N.D. +0.3 -0.0 +0.3
stress R2A with Zinc chloride 2560 uM +0.2 N.D. -0.0 -0.2 +0.4
no stress control no stress control +0.1 N.D. +0.1 +0.2 +0.1
pH R2A_PIPES pH 4.25 +0.3 N.D. +0.3 -0.4 +0.5
no stress control no stress control +0.2 N.D. +0.0 +0.2 +0.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.3 N.D. +0.0 +0.3 +0.4
no stress control no stress control +0.6 N.D. +0.1 +0.3 +0.1
no stress control no stress control +0.3 N.D. +0.3 -0.0 +0.5
stress R2A_PIPES with Cadmium chloride 64 uM +0.3 N.D. +0.2 +0.5 +0.1
stress R2A_PIPES with Cadmium chloride 64 uM +0.4 N.D. +0.3 +0.2 +0.5
no stress control no stress control +0.5 N.D. +0.2 +0.2 +0.4
stress R2A with Nickel (II) chloride 1696 uM +0.6 N.D. +0.3 +0.2 +0.6
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.2 N.D. +0.4 +0.6 +0.6
stress R2A with Nickel (II) chloride 1696 uM +0.6 N.D. +0.2 +0.3 +0.8
pH R2A_PIPES pH 4.25 +1.0 N.D. +0.2 +0.3 +0.7
remove
LRK55_RS13225
plot		 remove
LRK55_RS13230
plot		 remove
LRK55_RS13235		 remove
LRK55_RS13240
plot		 remove
LRK55_RS13245
plot