Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS13050 and LRK55_RS13055 are separated by 183 nucleotidesLRK55_RS13055 and LRK55_RS13060 are separated by 81 nucleotidesLRK55_RS13060 and LRK55_RS13065 are separated by 53 nucleotidesLRK55_RS13065 and LRK55_RS13070 overlap by 4 nucleotides LRK55_RS13050: LRK55_RS13050 - ISL3 family transposase, at 2,915,113 to 2,916,321 _RS13050 LRK55_RS13055: LRK55_RS13055 - tRNA-Phe, at 2,916,505 to 2,916,580 _RS13055 LRK55_RS13060: LRK55_RS13060 - oxidative damage protection protein, at 2,916,662 to 2,916,940 _RS13060 LRK55_RS13065: LRK55_RS13065 - A/G-specific adenine glycosylase, at 2,916,994 to 2,918,055 _RS13065 LRK55_RS13070: LRK55_RS13070 - membrane assembly protein AsmA, at 2,918,052 to 2,919,119 _RS13070
Group Condition LRK55_RS13050 LRK55_RS13055 LRK55_RS13060 LRK55_RS13065 LRK55_RS13070
pH R2A_PIPES pH 4.25 N.D. N.D. -0.8 -0.3 -1.3
pH R2A_PIPES pH 4.25 N.D. N.D. -1.0 -0.1 -1.1
pH R2A_PIPES pH 4.5 N.D. N.D. -1.2 -0.1 -0.6
pH R2A_PIPES pH 4.5 N.D. N.D. -1.3 +0.2 -0.6
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. N.D. -0.2 -0.0 -0.5
no stress control no stress control N.D. N.D. -0.1 -0.1 -0.4
no stress control no stress control N.D. N.D. -0.1 -0.2 -0.3
no stress control no stress control N.D. N.D. +0.2 -0.4 -0.3
no stress control no stress control N.D. N.D. +0.0 -0.1 -0.3
no stress control no stress control N.D. N.D. -0.0 -0.0 -0.2
no stress control no stress control N.D. N.D. -0.2 -0.1 +0.1
stress R2A with Zinc chloride 2560 uM N.D. N.D. -0.4 -0.0 +0.3
no stress control no stress control N.D. N.D. +0.2 +0.1 -0.4
stress R2A with Zinc chloride 2560 uM N.D. N.D. -0.4 -0.0 +0.5
stress R2A with Nickel (II) chloride 1696 uM N.D. N.D. +0.2 +0.2 -0.2
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. N.D. +0.2 +0.2 -0.1
stress R2A with Nickel (II) chloride 1696 uM N.D. N.D. +0.2 -0.1 +0.2
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. N.D. -0.0 +0.1 +0.2
stress R2A_PIPES with Cadmium chloride 64 uM N.D. N.D. +0.2 -0.0 +0.3
stress R2A_PIPES with Cadmium chloride 64 uM N.D. N.D. +0.3 -0.0 +0.4
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. N.D. +0.2 +0.1 +0.4
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. N.D. +0.1 -0.5 +1.4
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. N.D. +0.2 -0.1 +1.4
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