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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Number of genes on each side:
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS13005 and LRK55_RS13010 are separated by 427 nucleotides
LRK55_RS13010 and LRK55_RS13015 are separated by 836 nucleotides
LRK55_RS13015 and LRK55_RS13020 are separated by 23 nucleotides
LRK55_RS13020 and LRK55_RS13025 are separated by 68 nucleotides
LRK55_RS13005: LRK55_RS13005 - hypothetical protein, at 2,906,488 to 2,907,195
_RS13005
LRK55_RS13010: LRK55_RS13010 - PEP-CTERM sorting domain-containing protein, at 2,907,623 to 2,908,363
_RS13010
LRK55_RS13015: LRK55_RS13015 - hypothetical protein, at 2,909,200 to 2,909,445
_RS13015
LRK55_RS13020: LRK55_RS13020 - hypothetical protein, at 2,909,469 to 2,909,714
_RS13020
LRK55_RS13025: LRK55_RS13025 - hypothetical protein, at 2,909,783 to 2,910,442
_RS13025
Group
Condition
LRK55
_RS13005
LRK55
_RS13010
LRK55
_RS13015
LRK55
_RS13020
LRK55
_RS13025
pH
R2A_PIPES pH 4.25
-0.3
-0.1
-0.9
-0.5
-0.3
no stress control
no stress control
-0.3
-0.0
-0.3
-0.5
-0.5
stress
R2A with Nickel (II) chloride 1696 uM
-0.3
-0.2
-0.4
-0.4
-0.3
stress
R2A with Nickel (II) chloride 1696 uM
-0.3
-0.2
-0.2
-0.6
-0.3
pH
R2A_PIPES pH 4.25
-0.4
-0.2
-0.4
-0.1
-0.5
stress
R2A with Zinc chloride 2560 uM
-0.3
-0.1
-0.3
-0.2
-0.5
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
+0.0
-0.6
-0.5
-0.2
no stress control
no stress control
-0.2
-0.0
-0.2
-0.4
-0.4
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.3
-0.0
-0.3
-0.2
-0.3
stress
R2A with Zinc chloride 2560 uM
-0.2
-0.1
-0.1
-0.2
-0.6
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.0
-0.2
-0.4
-0.3
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
+0.1
-0.2
-0.1
-0.7
no stress control
no stress control
-0.1
+0.1
-0.2
-0.6
-0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.1
-0.1
-0.2
-0.4
pH
R2A_PIPES pH 4.5
-0.1
-0.0
-0.2
-0.4
-0.4
no stress control
no stress control
-0.2
-0.2
-0.4
-0.1
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
+0.1
-0.2
-0.1
-0.4
no stress control
no stress control
-0.2
-0.2
-0.2
-0.1
-0.3
no stress control
no stress control
-0.1
+0.0
-0.4
-0.2
-0.1
pH
R2A_PIPES pH 4.5
-0.1
-0.1
-0.3
-0.2
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
+0.1
-0.0
-0.3
-0.1
no stress control
no stress control
-0.1
+0.2
-0.1
-0.3
+0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.0
+0.0
+0.0
-0.2
-0.0
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