Fitness for 5 genes in Rhodanobacter denitrificans MT42

Add gene:

Number of genes on each side:  

Top 23 experiments (either direction), sorted by average fitness

Or view all 23 experiments or choose conditions or try the comparative fitness browser

500 ntLRK55_RS12765 and LRK55_RS12770 are separated by 146 nucleotidesLRK55_RS12770 and LRK55_RS12775 overlap by 4 nucleotidesLRK55_RS12775 and LRK55_RS12780 are separated by 115 nucleotidesLRK55_RS12780 and LRK55_RS12785 are separated by 432 nucleotides LRK55_RS12765: LRK55_RS12765 - glycoside hydrolase family 31 protein, at 2,840,084 to 2,842,333 _RS12765 LRK55_RS12770: LRK55_RS12770 - alpha-amylase family glycosyl hydrolase, at 2,842,480 to 2,844,033 _RS12770 LRK55_RS12775: LRK55_RS12775 - tryptophan 7-halogenase, at 2,844,030 to 2,845,577 _RS12775 LRK55_RS12780: LRK55_RS12780 - TonB-dependent receptor, at 2,845,693 to 2,848,605 _RS12780 LRK55_RS12785: LRK55_RS12785 - alpha-glucosidase family protein, at 2,849,038 to 2,850,660 _RS12785
Group Condition LRK55_RS12765 LRK55_RS12770 LRK55_RS12775 LRK55_RS12780 LRK55_RS12785
pH R2A_PIPES pH 4.25 +0.1 -0.2 +0.0 -0.0 -1.3
pH R2A_PIPES pH 4.25 +0.2 -0.2 -0.1 +0.2 -1.1
stress R2A with Nickel (II) chloride 1696 uM +0.0 -0.3 +0.2 -0.0 -0.7
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.0 -0.1 +0.2 +0.0 -0.9
stress R2A with Nickel (II) chloride 1696 uM -0.1 -0.2 +0.2 +0.0 -0.6
no stress control no stress control +0.1 -0.2 -0.0 +0.2 -0.7
no stress control no stress control -0.0 -0.0 +0.0 +0.2 -0.6
stress R2A_PIPES with Cadmium chloride 64 uM +0.1 +0.0 -0.0 +0.4 -0.9
no stress control no stress control +0.0 +0.0 +0.0 +0.1 -0.4
no stress control no stress control +0.1 +0.1 -0.4 +0.2 -0.2
stress R2A_PIPES with Cadmium chloride 64 uM +0.2 -0.1 -0.1 +0.6 -0.8
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 -0.0 +0.2 +0.2 -0.6
pH R2A_PIPES pH 4.5 +0.0 +0.1 +0.1 +0.0 -0.4
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.1 -0.0 +0.1 +0.5 -0.8
no stress control no stress control +0.2 -0.1 +0.2 +0.3 -0.6
no stress control no stress control +0.1 +0.1 +0.1 +0.2 -0.4
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.1 +0.1 +0.1 +0.5 -0.5
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.2 +0.2 +0.1 +0.5 -0.6
pH R2A_PIPES pH 4.5 +0.3 +0.2 +0.2 +0.3 -0.6
stress R2A with Zinc chloride 2560 uM +0.1 -0.1 +0.3 +1.0 -0.9
no stress control no stress control +0.2 +0.3 +0.2 +0.4 -0.4
stress R2A with Zinc chloride 2560 uM +0.1 -0.0 +0.3 +0.9 -0.6
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.4 +0.2 +0.1 +0.8 -0.5
remove
LRK55_RS12765
plot
remove
LRK55_RS12770
plot
remove
LRK55_RS12775
remove
LRK55_RS12780
plot
remove
LRK55_RS12785
plot