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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS12600 and LRK55_RS12605 are separated by 204 nucleotides
LRK55_RS12605 and LRK55_RS12610 are separated by 84 nucleotides
LRK55_RS12610 and LRK55_RS12615 are separated by 117 nucleotides
LRK55_RS12615 and LRK55_RS12620 are separated by 31 nucleotides
LRK55_RS12600: LRK55_RS12600 - KpsF/GutQ family sugar-phosphate isomerase, at 2,802,827 to 2,803,837
_RS12600
LRK55_RS12605: LRK55_RS12605 - BolA/IbaG family iron-sulfur metabolism protein, at 2,804,042 to 2,804,281
_RS12605
LRK55_RS12610: LRK55_RS12610 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 2,804,366 to 2,805,625
_RS12610
LRK55_RS12615: LRK55_RS12615 - hypothetical protein, at 2,805,743 to 2,806,426
_RS12615
LRK55_RS12620: LRK55_RS12620 - hypothetical protein, at 2,806,458 to 2,807,678
_RS12620
Group
Condition
LRK55
_RS12600
LRK55
_RS12605
LRK55
_RS12610
LRK55
_RS12615
LRK55
_RS12620
pH
R2A_PIPES pH 4.25
N.D.
-1.4
N.D.
-1.4
N.D.
pH
R2A_PIPES pH 4.25
N.D.
-2.3
N.D.
-0.1
N.D.
no stress control
no stress control
N.D.
-1.0
N.D.
-0.3
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
-1.0
N.D.
-0.2
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
-0.5
N.D.
-0.6
N.D.
pH
R2A_PIPES pH 4.5
N.D.
-0.9
N.D.
-0.2
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.4
N.D.
-0.4
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.2
N.D.
-0.6
N.D.
no stress control
no stress control
N.D.
-0.5
N.D.
-0.2
N.D.
no stress control
no stress control
N.D.
-0.5
N.D.
-0.1
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
-0.8
N.D.
+0.4
N.D.
no stress control
no stress control
N.D.
-0.5
N.D.
+0.1
N.D.
no stress control
no stress control
N.D.
-0.6
N.D.
+0.2
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
-0.4
N.D.
+0.1
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-0.4
N.D.
+0.2
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
-0.4
N.D.
+0.2
N.D.
pH
R2A_PIPES pH 4.5
N.D.
-0.6
N.D.
+0.4
N.D.
stress
R2A with Zinc chloride 2560 uM
N.D.
-0.3
N.D.
+0.2
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
+0.2
N.D.
-0.3
N.D.
stress
R2A with Zinc chloride 2560 uM
N.D.
-0.3
N.D.
+0.2
N.D.
no stress control
no stress control
N.D.
-0.3
N.D.
+0.2
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.2
N.D.
-0.1
N.D.
no stress control
no stress control
N.D.
-0.1
N.D.
+0.3
N.D.
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