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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS12535 and LRK55_RS12540 are separated by 39 nucleotides
LRK55_RS12540 and LRK55_RS12545 are separated by 170 nucleotides
LRK55_RS12545 and LRK55_RS12550 are separated by 150 nucleotides
LRK55_RS12550 and LRK55_RS12555 are separated by 8 nucleotides
LRK55_RS12535: LRK55_RS12535 - LysR family transcriptional regulator, at 2,791,785 to 2,792,678
_RS12535
LRK55_RS12540: LRK55_RS12540 - hypothetical protein, at 2,792,718 to 2,793,521
_RS12540
LRK55_RS12545: LRK55_RS12545 - phosphoenolpyruvate--protein phosphotransferase, at 2,793,692 to 2,795,437
_RS12545
LRK55_RS12550: LRK55_RS12550 - HPr family phosphocarrier protein, at 2,795,588 to 2,795,857
_RS12550
LRK55_RS12555: LRK55_RS12555 - PTS fructose transporter subunit IIA, at 2,795,866 to 2,796,258
_RS12555
Group
Condition
LRK55
_RS12535
LRK55
_RS12540
LRK55
_RS12545
LRK55
_RS12550
LRK55
_RS12555
pH
R2A_PIPES pH 4.25
-0.9
-0.1
+0.3
-1.1
-4.1
stress
R2A with Zinc chloride 2560 uM
+0.2
+0.0
+0.0
-1.0
-4.8
pH
R2A_PIPES pH 4.5
-0.8
+0.1
-0.0
-0.3
-4.4
stress
R2A with Nickel (II) chloride 1696 uM
-0.0
-0.0
-0.2
-0.3
-4.6
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
-0.0
+0.1
-0.9
-4.0
stress
R2A with Zinc chloride 2560 uM
-0.1
+0.1
-0.1
-0.1
-4.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
-0.1
-0.2
-0.1
-3.8
pH
R2A_PIPES pH 4.25
-1.2
+0.2
+0.2
+1.1
-4.2
no stress control
no stress control
-0.3
-0.2
-0.1
-0.2
-3.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.0
-0.1
-0.1
-0.3
-3.4
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.3
+0.0
-0.1
+0.0
-4.0
no stress control
no stress control
-0.1
-0.2
-0.3
-0.2
-3.0
no stress control
no stress control
-0.2
-0.1
-0.1
+0.7
-4.1
no stress control
no stress control
+0.2
-0.2
-0.3
+0.1
-3.5
no stress control
no stress control
+0.0
+0.1
+0.2
-0.5
-3.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.4
-0.0
+0.0
-0.9
-3.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.0
+0.2
+0.0
-1.1
-2.5
pH
R2A_PIPES pH 4.5
-0.3
+0.1
+0.7
-0.2
-3.7
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.0
-0.1
-0.1
-0.3
-2.8
no stress control
no stress control
-0.2
-0.0
-0.2
+0.5
-3.3
no stress control
no stress control
-0.0
-0.0
-0.2
-0.1
-2.7
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
+0.1
+0.3
+0.4
-3.5
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.4
-0.2
+0.1
+0.4
-3.2
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