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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS12480 and LRK55_RS12485 are separated by 383 nucleotides
LRK55_RS12485 and LRK55_RS12490 are separated by 26 nucleotides
LRK55_RS12490 and LRK55_RS12495 are separated by 124 nucleotides
LRK55_RS12495 and LRK55_RS12500 are separated by 45 nucleotides
LRK55_RS12480: LRK55_RS12480 - metal/formaldehyde-sensitive transcriptional repressor, at 2,782,649 to 2,782,918
_RS12480
LRK55_RS12485: LRK55_RS12485 - methyltransferase domain-containing protein, at 2,783,302 to 2,784,051
_RS12485
LRK55_RS12490: LRK55_RS12490 - LysR family transcriptional regulator, at 2,784,078 to 2,784,995
_RS12490
LRK55_RS12495: LRK55_RS12495 - NAD(P)-binding domain-containing protein, at 2,785,120 to 2,785,752
_RS12495
LRK55_RS12500: LRK55_RS12500 - DoxX family protein, at 2,785,798 to 2,786,187
_RS12500
Group
Condition
LRK55
_RS12480
LRK55
_RS12485
LRK55
_RS12490
LRK55
_RS12495
LRK55
_RS12500
pH
R2A_PIPES pH 4.25
N.D.
-0.7
+0.1
+0.1
-0.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
-0.1
-0.1
+0.1
+0.1
no stress control
no stress control
N.D.
+0.0
-0.0
+0.0
-0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
+0.0
-0.0
-0.1
+0.1
no stress control
no stress control
N.D.
+0.1
+0.0
-0.0
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-0.2
-0.1
+0.0
+0.3
stress
R2A with Zinc chloride 2560 uM
N.D.
-0.0
-0.0
+0.1
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
-0.1
-0.1
+0.3
+0.1
pH
R2A_PIPES pH 4.25
N.D.
+0.3
-0.0
-0.2
+0.2
no stress control
no stress control
N.D.
-0.2
+0.1
+0.2
+0.2
stress
R2A with Zinc chloride 2560 uM
N.D.
+0.3
+0.1
-0.1
-0.0
no stress control
no stress control
N.D.
+0.1
+0.2
-0.0
-0.0
no stress control
no stress control
N.D.
+0.1
+0.0
+0.0
+0.2
no stress control
no stress control
N.D.
+0.2
-0.2
+0.3
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.4
+0.0
-0.0
-0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
+0.3
+0.1
-0.2
+0.2
pH
R2A_PIPES pH 4.5
N.D.
+0.1
+0.0
-0.1
+0.4
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
+0.3
+0.1
-0.0
+0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
+0.1
+0.1
+0.4
+0.1
no stress control
no stress control
N.D.
+0.1
+0.2
+0.2
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
+0.0
+0.3
-0.2
+0.6
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
+0.3
+0.1
+0.1
+0.2
pH
R2A_PIPES pH 4.5
N.D.
+0.4
+0.2
+0.2
+0.3
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