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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS12470 and LRK55_RS12475 are separated by 30 nucleotides
LRK55_RS12475 and LRK55_RS12480 are separated by 55 nucleotides
LRK55_RS12480 and LRK55_RS12485 are separated by 383 nucleotides
LRK55_RS12485 and LRK55_RS12490 are separated by 26 nucleotides
LRK55_RS12470: LRK55_RS12470 - VOC family protein, at 2,781,241 to 2,781,609
_RS12470
LRK55_RS12475: LRK55_RS12475 - CDF family Co(II)/Ni(II) efflux transporter DmeF, at 2,781,640 to 2,782,593
_RS12475
LRK55_RS12480: LRK55_RS12480 - metal/formaldehyde-sensitive transcriptional repressor, at 2,782,649 to 2,782,918
_RS12480
LRK55_RS12485: LRK55_RS12485 - methyltransferase domain-containing protein, at 2,783,302 to 2,784,051
_RS12485
LRK55_RS12490: LRK55_RS12490 - LysR family transcriptional regulator, at 2,784,078 to 2,784,995
_RS12490
Group
Condition
LRK55
_RS12470
LRK55
_RS12475
LRK55
_RS12480
LRK55
_RS12485
LRK55
_RS12490
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.4
-0.3
N.D.
-0.1
-0.1
pH
R2A_PIPES pH 4.25
-0.3
+0.1
N.D.
-0.7
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
+0.1
N.D.
-0.2
-0.1
no stress control
no stress control
-0.2
-0.2
N.D.
+0.1
+0.0
no stress control
no stress control
-0.3
+0.1
N.D.
+0.1
+0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
-0.2
N.D.
+0.1
+0.1
no stress control
no stress control
-0.0
-0.0
N.D.
+0.0
-0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.1
+0.0
N.D.
-0.1
-0.1
no stress control
no stress control
-0.2
+0.1
N.D.
+0.2
-0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.0
+0.1
N.D.
+0.0
-0.0
no stress control
no stress control
+0.1
+0.1
N.D.
-0.2
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
-0.1
N.D.
+0.3
+0.1
stress
R2A with Zinc chloride 2560 uM
-0.0
+0.2
N.D.
-0.0
-0.0
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
-0.1
N.D.
+0.0
+0.3
no stress control
no stress control
-0.0
+0.0
N.D.
+0.1
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
+0.0
N.D.
+0.4
+0.0
stress
R2A with Zinc chloride 2560 uM
-0.2
+0.2
N.D.
+0.3
+0.1
pH
R2A_PIPES pH 4.5
+0.0
+0.2
N.D.
+0.1
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
+0.1
N.D.
+0.3
+0.1
no stress control
no stress control
-0.1
+0.3
N.D.
+0.1
+0.2
pH
R2A_PIPES pH 4.5
-0.2
+0.3
N.D.
+0.4
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
+0.2
N.D.
+0.3
+0.1
pH
R2A_PIPES pH 4.25
+0.5
+0.1
N.D.
+0.3
-0.0
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