Fitness for 5 genes in Rhodanobacter denitrificans MT42

Add gene:

Number of genes on each side:  

Top 23 experiments (either direction), sorted by average fitness

Or view all 23 experiments or choose conditions or try the comparative fitness browser

500 ntLRK55_RS12365 and LRK55_RS12370 are separated by 85 nucleotidesLRK55_RS12370 and LRK55_RS12375 overlap by 4 nucleotidesLRK55_RS12375 and LRK55_RS12380 overlap by 1 nucleotidesLRK55_RS12380 and LRK55_RS12385 are separated by 212 nucleotides LRK55_RS12365: LRK55_RS12365 - bifunctional aspartate kinase/diaminopimelate decarboxylase, at 2,747,273 to 2,749,834 _RS12365 LRK55_RS12370: LRK55_RS12370 - endonuclease domain-containing protein, at 2,749,920 to 2,750,324 _RS12370 LRK55_RS12375: LRK55_RS12375 - UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L- glutamate epimerase, at 2,750,321 to 2,751,661 _RS12375 LRK55_RS12380: LRK55_RS12380 - UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase, at 2,751,661 to 2,753,034 _RS12380 LRK55_RS12385: LRK55_RS12385 - AbrB/MazE/SpoVT family DNA-binding domain-containing protein, at 2,753,247 to 2,753,360 _RS12385
Group Condition LRK55_RS12365 LRK55_RS12370 LRK55_RS12375 LRK55_RS12380 LRK55_RS12385
pH R2A_PIPES pH 4.5 -1.6 +0.1 N.D. N.D. N.D.
stress R2A with Zinc chloride 2560 uM -1.4 -0.1 N.D. N.D. N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -1.2 -0.1 N.D. N.D. N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -1.3 +0.0 N.D. N.D. N.D.
pH R2A_PIPES pH 4.25 -1.7 +0.6 N.D. N.D. N.D.
pH R2A_PIPES pH 4.25 -1.9 +0.7 N.D. N.D. N.D.
no stress control no stress control -0.6 -0.1 N.D. N.D. N.D.
stress R2A with Zinc chloride 2560 uM -1.1 +0.5 N.D. N.D. N.D.
no stress control no stress control -0.7 +0.1 N.D. N.D. N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.5 -0.1 N.D. N.D. N.D.
stress R2A_PIPES with Cadmium chloride 64 uM -1.0 +0.4 N.D. N.D. N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.6 +0.0 N.D. N.D. N.D.
stress R2A with Nickel (II) chloride 1696 uM -0.7 +0.2 N.D. N.D. N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.7 +0.2 N.D. N.D. N.D.
pH R2A_PIPES pH 4.5 -1.1 +0.6 N.D. N.D. N.D.
no stress control no stress control -0.5 +0.0 N.D. N.D. N.D.
stress R2A with Nickel (II) chloride 1696 uM -0.7 +0.2 N.D. N.D. N.D.
stress R2A_PIPES with Cadmium chloride 64 uM -0.9 +0.5 N.D. N.D. N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.7 +0.3 N.D. N.D. N.D.
no stress control no stress control -0.5 +0.1 N.D. N.D. N.D.
no stress control no stress control -0.5 +0.2 N.D. N.D. N.D.
no stress control no stress control -0.6 +0.3 N.D. N.D. N.D.
no stress control no stress control -0.6 +0.5 N.D. N.D. N.D.
remove
LRK55_RS12365
plot
remove
LRK55_RS12370
plot
remove
LRK55_RS12375
remove
LRK55_RS12380
plot
remove
LRK55_RS12385
plot