Fitness for 5 genes in Rhodanobacter denitrificans MT42

Add gene:

Number of genes on each side:  

Top 23 experiments (either direction), sorted by average fitness

Or view all 23 experiments or choose conditions or try the comparative fitness browser

500 ntLRK55_RS12330 and LRK55_RS12335 overlap by 4 nucleotidesLRK55_RS12335 and LRK55_RS12340 are separated by 51 nucleotidesLRK55_RS12340 and LRK55_RS12345 are separated by 249 nucleotidesLRK55_RS12345 and LRK55_RS12350 are separated by 64 nucleotides LRK55_RS12330: LRK55_RS12330 - molybdopterin-dependent oxidoreductase, at 2,738,487 to 2,740,742 _RS12330 LRK55_RS12335: LRK55_RS12335 - (2Fe-2S)-binding protein, at 2,740,739 to 2,741,275 _RS12335 LRK55_RS12340: LRK55_RS12340 - amino acid permease, at 2,741,327 to 2,742,655 _RS12340 LRK55_RS12345: LRK55_RS12345 - outer membrane beta-barrel protein, at 2,742,905 to 2,743,486 _RS12345 LRK55_RS12350: LRK55_RS12350 - PhzF family phenazine biosynthesis protein, at 2,743,551 to 2,744,429 _RS12350
Group Condition LRK55_RS12330 LRK55_RS12335 LRK55_RS12340 LRK55_RS12345 LRK55_RS12350
pH R2A_PIPES pH 4.5 -2.5 -2.9 -0.0 +0.0 +0.2
stress R2A_PIPES with Cadmium chloride 64 uM -1.8 -3.0 -0.3 -0.0 +0.1
pH R2A_PIPES pH 4.5 -2.6 -2.7 +0.1 +0.1 +0.2
stress R2A_PIPES with Cadmium chloride 64 uM -2.0 -2.7 -0.1 -0.3 +0.2
stress R2A with Zinc chloride 2560 uM -1.8 -3.5 +0.1 -0.1 +0.5
no stress control no stress control -1.4 -2.9 -0.1 -0.1 -0.0
stress R2A_PIPES with Aluminum chloride 0.140625 mM -1.5 -2.2 -0.2 -0.1 -0.2
stress R2A with Nickel (II) chloride 1696 uM -1.4 -3.1 -0.1 +0.0 +0.5
pH R2A_PIPES pH 4.25 -2.2 -2.5 +0.2 +0.7 -0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM -1.6 -2.1 -0.3 -0.1 +0.3
no stress control no stress control -1.6 -1.8 +0.1 -0.2 +0.2
no stress control no stress control -1.5 -1.4 -0.0 -0.1 +0.1
stress R2A with Zinc chloride 2560 uM -2.2 -0.9 +0.0 -0.1 +0.4
no stress control no stress control -1.6 -1.3 -0.0 +0.1 +0.3
pH R2A_PIPES pH 4.25 -1.9 -2.1 +0.4 +0.8 +0.2
no stress control no stress control -1.3 -1.3 +0.1 +0.0 -0.1
stress R2A with Nickel (II) chloride 1696 uM -1.7 -1.1 +0.1 -0.0 +0.1
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.9 -1.3 -0.2 -0.0 -0.1
no stress control no stress control -1.5 -1.0 +0.1 -0.2 +0.2
no stress control no stress control -1.3 -1.3 +0.0 -0.1 +0.4
stress R2A with Metal_ion_mix_sitestressplate 2 x -1.0 -1.6 -0.1 +0.0 +0.5
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.7 -0.7 +0.0 +0.1 +0.5
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.5 +0.3 +0.0 -0.0 +0.5
remove
LRK55_RS12330
plot
remove
LRK55_RS12335
plot
remove
LRK55_RS12340
remove
LRK55_RS12345
plot
remove
LRK55_RS12350
plot