Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS12040 and LRK55_RS12045 overlap by 4 nucleotidesLRK55_RS12045 and LRK55_RS12050 are separated by 15 nucleotidesLRK55_RS12050 and LRK55_RS12055 are separated by 35 nucleotidesLRK55_RS12055 and LRK55_RS12060 are separated by 150 nucleotides LRK55_RS12040: LRK55_RS12040 - 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA, at 2,667,222 to 2,668,010 _RS12040 LRK55_RS12045: LRK55_RS12045 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 2,668,007 to 2,669,056 _RS12045 LRK55_RS12050: LRK55_RS12050 - peptidylprolyl isomerase, at 2,669,072 to 2,670,412 _RS12050 LRK55_RS12055: LRK55_RS12055 - LPS assembly protein LptD, at 2,670,448 to 2,672,829 _RS12055 LRK55_RS12060: LRK55_RS12060 - histone deacetylase family protein, at 2,672,980 to 2,673,900 _RS12060
Group Condition LRK55_RS12040 LRK55_RS12045 LRK55_RS12050 LRK55_RS12055 LRK55_RS12060
pH R2A_PIPES pH 4.25 -2.1 N.D. N.D. N.D. +0.2
stress R2A with Metal_ion_mix_sitestressplate 2 x -1.9 N.D. N.D. N.D. -0.0
stress R2A with Metal_ion_mix_sitestressplate 2 x -1.6 N.D. N.D. N.D. +0.3
pH R2A_PIPES pH 4.25 -2.1 N.D. N.D. N.D. +0.9
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.9 N.D. N.D. N.D. +0.0
pH R2A_PIPES pH 4.5 -1.1 N.D. N.D. N.D. +0.2
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.9 N.D. N.D. N.D. +0.0
no stress control no stress control -0.9 N.D. N.D. N.D. +0.1
no stress control no stress control -0.9 N.D. N.D. N.D. +0.2
pH R2A_PIPES pH 4.5 -1.1 N.D. N.D. N.D. +0.4
stress R2A with Nickel (II) chloride 1696 uM -1.0 N.D. N.D. N.D. +0.3
no stress control no stress control -1.1 N.D. N.D. N.D. +0.3
no stress control no stress control -1.0 N.D. N.D. N.D. +0.3
stress R2A with Zinc chloride 2560 uM -1.1 N.D. N.D. N.D. +0.5
no stress control no stress control -0.8 N.D. N.D. N.D. +0.3
stress R2A_PIPES with Cadmium chloride 64 uM -0.6 N.D. N.D. N.D. +0.1
no stress control no stress control -0.8 N.D. N.D. N.D. +0.3
stress R2A with Nickel (II) chloride 1696 uM -0.7 N.D. N.D. N.D. +0.2
stress R2A with Zinc chloride 2560 uM -0.6 N.D. N.D. N.D. +0.3
no stress control no stress control -0.6 N.D. N.D. N.D. +0.2
stress R2A_PIPES with Cadmium chloride 64 uM -0.5 N.D. N.D. N.D. +0.4
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 N.D. N.D. N.D. +0.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.0 N.D. N.D. N.D. +0.4
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