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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS11935 and LRK55_RS11940 are separated by 42 nucleotides
LRK55_RS11940 and LRK55_RS11945 overlap by 4 nucleotides
LRK55_RS11945 and LRK55_RS11950 overlap by 4 nucleotides
LRK55_RS11950 and LRK55_RS11955 overlap by 4 nucleotides
LRK55_RS11935: LRK55_RS11935 - division/cell wall cluster transcriptional repressor MraZ, at 2,643,892 to 2,644,338
_RS11935
LRK55_RS11940: LRK55_RS11940 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 2,644,381 to 2,645,322
_RS11940
LRK55_RS11945: LRK55_RS11945 - cell division protein FtsL, at 2,645,319 to 2,645,588
_RS11945
LRK55_RS11950: LRK55_RS11950 - penicillin-binding transpeptidase domain-containing protein, at 2,645,585 to 2,647,402
_RS11950
LRK55_RS11955: LRK55_RS11955 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase, at 2,647,399 to 2,648,907
_RS11955
Group
Condition
LRK55
_RS11935
LRK55
_RS11940
LRK55
_RS11945
LRK55
_RS11950
LRK55
_RS11955
pH
R2A_PIPES pH 4.25
-3.2
N.D.
N.D.
N.D.
N.D.
stress
R2A with Zinc chloride 2560 uM
-2.7
N.D.
N.D.
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-1.9
N.D.
N.D.
N.D.
N.D.
no stress control
no stress control
-1.8
N.D.
N.D.
N.D.
N.D.
no stress control
no stress control
-1.8
N.D.
N.D.
N.D.
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
-1.8
N.D.
N.D.
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
-1.8
N.D.
N.D.
N.D.
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
-1.6
N.D.
N.D.
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-1.6
N.D.
N.D.
N.D.
N.D.
stress
R2A with Zinc chloride 2560 uM
-1.6
N.D.
N.D.
N.D.
N.D.
no stress control
no stress control
-1.5
N.D.
N.D.
N.D.
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-1.4
N.D.
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.5
-1.4
N.D.
N.D.
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
-1.3
N.D.
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.25
-1.1
N.D.
N.D.
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-1.1
N.D.
N.D.
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-1.0
N.D.
N.D.
N.D.
N.D.
no stress control
no stress control
-1.0
N.D.
N.D.
N.D.
N.D.
no stress control
no stress control
-0.8
N.D.
N.D.
N.D.
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.8
N.D.
N.D.
N.D.
N.D.
no stress control
no stress control
-0.7
N.D.
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.5
-0.6
N.D.
N.D.
N.D.
N.D.
no stress control
no stress control
-0.3
N.D.
N.D.
N.D.
N.D.
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