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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS11620 and LRK55_RS11625 are separated by 218 nucleotides
LRK55_RS11625 and LRK55_RS11630 are separated by 4 nucleotides
LRK55_RS11630 and LRK55_RS11635 are separated by 58 nucleotides
LRK55_RS11635 and LRK55_RS11640 are separated by 144 nucleotides
LRK55_RS11620: LRK55_RS11620 - MarR family transcriptional regulator, at 2,561,480 to 2,561,932
_RS11620
LRK55_RS11625: LRK55_RS11625 - efflux RND transporter periplasmic adaptor subunit, at 2,562,151 to 2,563,263
_RS11625
LRK55_RS11630: LRK55_RS11630 - efflux RND transporter permease subunit, at 2,563,268 to 2,566,375
_RS11630
LRK55_RS11635: LRK55_RS11635 - hypothetical protein, at 2,566,434 to 2,566,826
_RS11635
LRK55_RS11640: LRK55_RS11640 - M20/M25/M40 family metallo-hydrolase, at 2,566,971 to 2,568,404
_RS11640
Group
Condition
LRK55
_RS11620
LRK55
_RS11625
LRK55
_RS11630
LRK55
_RS11635
LRK55
_RS11640
stress
R2A with Zinc chloride 2560 uM
-2.2
+0.1
-0.1
-0.4
-0.3
pH
R2A_PIPES pH 4.25
-0.3
-1.3
-1.0
-0.2
+0.2
stress
R2A with Zinc chloride 2560 uM
-1.5
-0.2
-0.3
-0.3
-0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
-1.7
-0.3
+0.0
-0.1
-0.2
no stress control
no stress control
-0.4
-0.6
-0.1
-0.6
+0.1
no stress control
no stress control
-0.7
-0.2
-0.2
-0.5
-0.1
pH
R2A_PIPES pH 4.25
-0.3
-0.9
-1.0
+0.7
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-1.8
-0.0
+0.1
+0.1
+0.1
no stress control
no stress control
-0.5
-0.3
-0.2
-0.3
-0.1
no stress control
no stress control
-0.5
-0.2
-0.1
-0.2
-0.4
no stress control
no stress control
-0.7
-0.2
-0.1
-0.3
-0.0
no stress control
no stress control
-0.6
-0.4
-0.2
+0.1
-0.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
-0.5
-0.1
-0.5
+0.1
pH
R2A_PIPES pH 4.5
-0.4
-0.5
+0.1
-0.2
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
-0.2
-0.3
-0.2
+0.2
-0.0
no stress control
no stress control
-0.4
-0.1
-0.2
+0.4
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.4
-0.2
-0.0
+0.3
-0.0
pH
R2A_PIPES pH 4.5
-0.3
-0.2
+0.2
-0.0
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.2
-0.1
-0.0
-0.0
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.1
+0.2
+0.2
+0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
+0.2
+0.2
-0.1
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
+1.5
+1.6
+0.0
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.5
+1.7
+1.8
+0.2
-0.2
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