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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS11465 and LRK55_RS11470 are separated by 5 nucleotides
LRK55_RS11470 and LRK55_RS11475 are separated by 76 nucleotides
LRK55_RS11475 and LRK55_RS11480 overlap by 4 nucleotides
LRK55_RS11480 and LRK55_RS11485 are separated by 75 nucleotides
LRK55_RS11465: LRK55_RS11465 - RdgB/HAM1 family non-canonical purine NTP pyrophosphatase, at 2,528,939 to 2,529,538
_RS11465
LRK55_RS11470: LRK55_RS11470 - ribonuclease PH, at 2,529,544 to 2,530,275
_RS11470
LRK55_RS11475: LRK55_RS11475 - YicC family protein, at 2,530,352 to 2,531,215
_RS11475
LRK55_RS11480: LRK55_RS11480 - guanylate kinase, at 2,531,212 to 2,531,847
_RS11480
LRK55_RS11485: LRK55_RS11485 - ATP-binding cassette domain-containing protein, at 2,531,923 to 2,532,759
_RS11485
Group
Condition
LRK55
_RS11465
LRK55
_RS11470
LRK55
_RS11475
LRK55
_RS11480
LRK55
_RS11485
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.0
-0.5
-0.3
N.D.
-0.5
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
-0.2
-0.1
N.D.
-0.8
no stress control
no stress control
+0.1
-0.2
-0.3
N.D.
-0.9
no stress control
no stress control
-0.1
-0.3
-0.1
N.D.
-0.7
no stress control
no stress control
+0.1
-0.4
-0.2
N.D.
-0.7
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
-0.8
+0.5
N.D.
-0.6
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.0
-0.2
+0.1
N.D.
-1.0
no stress control
no stress control
-0.1
-0.2
-0.1
N.D.
-0.5
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
-0.3
+0.1
N.D.
-0.6
no stress control
no stress control
+0.0
-0.2
-0.1
N.D.
-0.6
pH
R2A_PIPES pH 4.5
-0.3
+0.0
+0.0
N.D.
-0.5
stress
R2A with Zinc chloride 2560 uM
+0.1
-0.0
+0.8
N.D.
-1.7
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
-0.6
+0.3
N.D.
-0.5
no stress control
no stress control
+0.1
-0.1
+0.2
N.D.
-0.6
pH
R2A_PIPES pH 4.5
-0.1
+0.0
+0.3
N.D.
-0.6
stress
R2A with Zinc chloride 2560 uM
-0.0
+0.2
+0.8
N.D.
-1.2
no stress control
no stress control
+0.1
-0.1
+0.1
N.D.
-0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.3
+0.3
+0.9
N.D.
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
+0.6
-0.5
N.D.
+0.9
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.2
+0.2
+0.6
N.D.
+0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.7
-0.6
N.D.
+1.8
pH
R2A_PIPES pH 4.25
-0.3
-0.6
+1.3
N.D.
+2.6
pH
R2A_PIPES pH 4.25
-0.0
-0.4
+1.1
N.D.
+2.7
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