Fitness for 5 genes in Rhodanobacter denitrificans MT42

Add gene:

Number of genes on each side:  

Top 23 experiments (either direction), sorted by average fitness

Or view all 23 experiments or choose conditions or try the comparative fitness browser

500 ntLRK55_RS11450 and LRK55_RS11455 overlap by 4 nucleotidesLRK55_RS11455 and LRK55_RS11460 are separated by 88 nucleotidesLRK55_RS11460 and LRK55_RS11465 overlap by 4 nucleotidesLRK55_RS11465 and LRK55_RS11470 are separated by 5 nucleotides LRK55_RS11450: LRK55_RS11450 - PilZ domain-containing protein, at 2,525,049 to 2,525,396 _RS11450 LRK55_RS11455: LRK55_RS11455 - DUF1631 family protein, at 2,525,393 to 2,527,687 _RS11455 LRK55_RS11460: LRK55_RS11460 - radical SAM family heme chaperone HemW, at 2,527,776 to 2,528,942 _RS11460 LRK55_RS11465: LRK55_RS11465 - RdgB/HAM1 family non-canonical purine NTP pyrophosphatase, at 2,528,939 to 2,529,538 _RS11465 LRK55_RS11470: LRK55_RS11470 - ribonuclease PH, at 2,529,544 to 2,530,275 _RS11470
Group Condition LRK55_RS11450 LRK55_RS11455 LRK55_RS11460 LRK55_RS11465 LRK55_RS11470
pH R2A_PIPES pH 4.25 +0.1 -0.2 -0.8 -0.3 -0.6
stress R2A with Nickel (II) chloride 1696 uM +0.0 +0.0 -0.5 -0.1 -0.8
no stress control no stress control -0.3 +0.1 -0.4 +0.1 -0.4
stress R2A with Nickel (II) chloride 1696 uM +0.1 +0.2 -0.5 +0.1 -0.6
pH R2A_PIPES pH 4.25 +0.1 +0.1 -0.5 -0.0 -0.4
stress R2A_PIPES with Cadmium chloride 64 uM +0.5 +0.0 -0.7 -0.1 -0.3
no stress control no stress control -0.1 +0.0 -0.4 +0.0 -0.2
stress R2A_PIPES with Cadmium chloride 64 uM +0.6 +0.2 -0.7 -0.0 -0.5
no stress control no stress control +0.3 +0.1 -0.4 -0.1 -0.3
no stress control no stress control +0.0 -0.1 -0.3 +0.1 -0.1
pH R2A_PIPES pH 4.5 +0.2 +0.1 -0.5 -0.1 +0.0
no stress control no stress control +0.4 +0.2 -0.3 -0.1 -0.2
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.2 +0.1 -0.1 -0.2 -0.2
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.2 +0.2 -0.3 +0.0 -0.2
stress R2A with Zinc chloride 2560 uM +0.1 +0.1 -0.4 +0.1 -0.0
no stress control no stress control +0.3 -0.0 -0.3 +0.1 -0.2
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.3 +0.0 -0.1 -0.3 +0.3
no stress control no stress control +0.3 +0.2 -0.3 +0.1 -0.1
pH R2A_PIPES pH 4.5 +0.8 +0.2 -0.4 -0.3 +0.0
stress R2A with Zinc chloride 2560 uM +0.3 +0.2 -0.2 -0.0 +0.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.2 +0.2 -0.2 -0.1 +0.6
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.2 +0.2 -0.1 +0.2 +0.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.2 -0.0 -0.1 +0.2 +0.7
remove
LRK55_RS11450
plot
remove
LRK55_RS11455
plot
remove
LRK55_RS11460
remove
LRK55_RS11465
plot
remove
LRK55_RS11470
plot