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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS11335 and LRK55_RS11340 overlap by 4 nucleotides
LRK55_RS11340 and LRK55_RS11345 overlap by 4 nucleotides
LRK55_RS11345 and LRK55_RS11350 are separated by 115 nucleotides
LRK55_RS11350 and LRK55_RS11355 are separated by 414 nucleotides
LRK55_RS11335: LRK55_RS11335 - sensor histidine kinase, at 2,502,451 to 2,503,182
_RS11335
LRK55_RS11340: LRK55_RS11340 - serine/threonine-protein kinase, at 2,503,179 to 2,506,478
_RS11340
LRK55_RS11345: LRK55_RS11345 - FHA domain-containing protein, at 2,506,475 to 2,507,389
_RS11345
LRK55_RS11350: LRK55_RS11350 - hypothetical protein, at 2,507,505 to 2,508,347
_RS11350
LRK55_RS11355: LRK55_RS11355 - S8 family serine peptidase, at 2,508,762 to 2,511,206
_RS11355
Group
Condition
LRK55
_RS11335
LRK55
_RS11340
LRK55
_RS11345
LRK55
_RS11350
LRK55
_RS11355
stress
R2A with Nickel (II) chloride 1696 uM
+0.0
-0.1
-1.4
+0.5
-0.0
pH
R2A_PIPES pH 4.25
+0.8
+0.1
-1.5
+0.1
-0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.2
-0.0
-0.8
+0.2
+0.1
pH
R2A_PIPES pH 4.5
+0.2
-0.0
-0.4
-0.0
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.4
-0.1
+0.4
+0.1
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.0
+0.1
-0.1
+0.1
+0.0
no stress control
no stress control
-0.4
-0.1
+0.4
+0.3
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.2
+0.1
+0.3
+0.0
+0.0
no stress control
no stress control
+0.4
-0.0
+0.2
-0.2
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.3
+0.0
+0.6
-0.5
+0.1
no stress control
no stress control
-0.3
+0.1
+0.8
+0.0
+0.1
no stress control
no stress control
+0.1
+0.1
+0.7
-0.1
+0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.4
-0.0
+0.1
+0.5
+0.0
stress
R2A with Zinc chloride 2560 uM
-0.3
+0.2
+0.7
+0.3
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.0
+0.0
+0.5
+0.6
-0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.8
-0.0
+0.8
-0.4
+0.0
pH
R2A_PIPES pH 4.5
+0.4
+0.1
+0.1
+0.7
+0.1
no stress control
no stress control
+0.1
+0.1
+0.4
+0.7
+0.1
no stress control
no stress control
+0.2
+0.1
+0.5
+0.5
+0.2
no stress control
no stress control
+0.4
-0.1
+0.8
+0.3
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.9
+0.1
+0.5
+0.2
+0.2
stress
R2A with Zinc chloride 2560 uM
+0.6
+0.3
+0.5
+0.8
+0.2
pH
R2A_PIPES pH 4.25
+0.4
+0.3
+1.6
+0.6
-0.1
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