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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Number of genes on each side:
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS11300 and LRK55_RS11305 are separated by 5 nucleotides
LRK55_RS11305 and LRK55_RS11310 are separated by 3 nucleotides
LRK55_RS11310 and LRK55_RS11315 are separated by 93 nucleotides
LRK55_RS11315 and LRK55_RS11320 are separated by 288 nucleotides
LRK55_RS11300: LRK55_RS11300 - indole-3-glycerol phosphate synthase TrpC, at 2,496,696 to 2,497,490
_RS11300
LRK55_RS11305: LRK55_RS11305 - haloacid dehalogenase-like hydrolase, at 2,497,496 to 2,498,188
_RS11305
LRK55_RS11310: LRK55_RS11310 - sulfite exporter TauE/SafE family protein, at 2,498,192 to 2,498,935
_RS11310
LRK55_RS11315: LRK55_RS11315 - cAMP-activated global transcriptional regulator CRP, at 2,499,029 to 2,499,730
_RS11315
LRK55_RS11320: LRK55_RS11320 - adenosylmethionine decarboxylase, at 2,500,019 to 2,500,804
_RS11320
Group
Condition
LRK55
_RS11300
LRK55
_RS11305
LRK55
_RS11310
LRK55
_RS11315
LRK55
_RS11320
stress
R2A with Zinc chloride 2560 uM
-4.9
+0.1
+0.0
-0.3
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
-5.2
+0.8
+0.0
+0.5
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
-3.2
-0.2
+0.0
+0.6
N.D.
no stress control
no stress control
-4.0
-0.2
+0.5
+0.8
N.D.
no stress control
no stress control
-4.3
+0.1
+0.5
+1.0
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
-4.3
+0.5
+0.6
+0.4
N.D.
no stress control
no stress control
-4.2
+0.1
+0.6
+0.8
N.D.
pH
R2A_PIPES pH 4.5
-3.0
-0.0
+0.7
-0.2
N.D.
stress
R2A with Zinc chloride 2560 uM
-3.0
+0.1
+0.6
-0.2
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-4.0
+0.2
+0.7
+0.9
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-2.7
+0.4
+0.3
-0.0
N.D.
pH
R2A_PIPES pH 4.25
-3.4
+0.0
+0.7
+0.7
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-2.6
-0.4
+0.5
+0.5
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-2.7
+0.4
+0.5
-0.0
N.D.
no stress control
no stress control
-3.0
+0.1
+0.3
+0.9
N.D.
no stress control
no stress control
-3.7
+0.5
+0.5
+1.0
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-2.2
+0.0
+0.1
+0.7
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-2.7
-0.0
+0.6
+0.9
N.D.
no stress control
no stress control
-2.3
+0.0
+0.2
+0.8
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
-2.3
+0.0
+0.5
+0.8
N.D.
pH
R2A_PIPES pH 4.5
-2.2
+0.2
+1.0
+0.1
N.D.
no stress control
no stress control
-1.4
-0.3
+0.5
+0.8
N.D.
pH
R2A_PIPES pH 4.25
-2.0
+0.2
+1.1
+0.8
N.D.
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