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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS11285 and LRK55_RS11290 are separated by 144 nucleotides
LRK55_RS11290 and LRK55_RS11295 overlap by 4 nucleotides
LRK55_RS11295 and LRK55_RS11300 are separated by 90 nucleotides
LRK55_RS11300 and LRK55_RS11305 are separated by 5 nucleotides
LRK55_RS11285: LRK55_RS11285 - DUF2220 family protein, at 2,493,610 to 2,494,812
_RS11285
LRK55_RS11290: LRK55_RS11290 - aminodeoxychorismate/anthranilate synthase component II, at 2,494,957 to 2,495,556
_RS11290
LRK55_RS11295: LRK55_RS11295 - anthranilate phosphoribosyltransferase, at 2,495,553 to 2,496,605
_RS11295
LRK55_RS11300: LRK55_RS11300 - indole-3-glycerol phosphate synthase TrpC, at 2,496,696 to 2,497,490
_RS11300
LRK55_RS11305: LRK55_RS11305 - haloacid dehalogenase-like hydrolase, at 2,497,496 to 2,498,188
_RS11305
Group
Condition
LRK55
_RS11285
LRK55
_RS11290
LRK55
_RS11295
LRK55
_RS11300
LRK55
_RS11305
no stress control
no stress control
-0.3
-5.3
-4.2
-4.0
-0.2
stress
R2A with Zinc chloride 2560 uM
-0.2
-1.0
-5.5
-4.9
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
-2.4
-4.3
-2.6
-0.4
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
-2.4
-2.8
-5.2
+0.8
pH
R2A_PIPES pH 4.5
-0.4
-4.0
-2.3
-2.2
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.2
-1.2
-3.5
-3.2
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.5
-1.7
-2.1
-4.0
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.3
-2.8
-2.6
-2.7
+0.4
no stress control
no stress control
+0.2
-1.2
-2.7
-4.3
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.3
-2.2
-2.8
-2.2
+0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
-2.1
-2.7
-2.7
+0.4
pH
R2A_PIPES pH 4.5
-0.4
-0.7
-3.0
-3.0
-0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.4
-1.2
-1.7
-4.3
+0.5
pH
R2A_PIPES pH 4.25
-0.6
-0.3
-2.7
-3.4
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
-0.3
-0.7
-3.7
-2.3
+0.0
no stress control
no stress control
+0.1
-2.0
-1.9
-3.7
+0.5
no stress control
no stress control
-0.0
-1.4
-1.3
-4.2
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
-1.1
-2.7
-2.7
-0.0
no stress control
no stress control
-0.0
-1.5
-2.7
-2.3
+0.0
pH
R2A_PIPES pH 4.25
-0.5
+0.0
-3.8
-2.0
+0.2
no stress control
no stress control
-0.1
-0.7
-2.2
-3.0
+0.1
no stress control
no stress control
-0.2
-1.9
-2.0
-1.4
-0.3
stress
R2A with Zinc chloride 2560 uM
-0.0
+0.1
-1.3
-3.0
+0.1
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