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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS11195 and LRK55_RS11200 are separated by 29 nucleotides
LRK55_RS11200 and LRK55_RS11205 overlap by 4 nucleotides
LRK55_RS11205 and LRK55_RS11210 overlap by 14 nucleotides
LRK55_RS11210 and LRK55_RS11215 overlap by 4 nucleotides
LRK55_RS11195: LRK55_RS11195 - serine hydrolase domain-containing protein, at 2,469,422 to 2,470,471
_RS11195
LRK55_RS11200: LRK55_RS11200 - M15 family metallopeptidase, at 2,470,501 to 2,471,235
_RS11200
LRK55_RS11205: LRK55_RS11205 - serine hydrolase, at 2,471,232 to 2,472,911
_RS11205
LRK55_RS11210: LRK55_RS11210 - dipeptidase, at 2,472,898 to 2,474,109
_RS11210
LRK55_RS11215: LRK55_RS11215 - diaminopimelate decarboxylase, at 2,474,106 to 2,475,410
_RS11215
Group
Condition
LRK55
_RS11195
LRK55
_RS11200
LRK55
_RS11205
LRK55
_RS11210
LRK55
_RS11215
stress
R2A with Nickel (II) chloride 1696 uM
-0.3
-1.3
+0.0
+0.1
-0.2
stress
R2A with Zinc chloride 2560 uM
-0.1
-0.7
-0.1
+0.2
-0.0
no stress control
no stress control
-0.1
-1.0
-0.1
+0.1
+0.2
pH
R2A_PIPES pH 4.5
-0.4
-0.1
-0.1
-0.0
-0.1
pH
R2A_PIPES pH 4.25
+0.2
-0.6
+0.3
-0.3
-0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.4
-0.1
+0.2
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.2
-0.2
-0.1
+0.2
no stress control
no stress control
+0.0
+0.0
+0.2
+0.1
-0.6
no stress control
no stress control
+0.2
-1.0
+0.1
+0.0
+0.4
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
-0.4
-0.0
+0.3
-0.0
pH
R2A_PIPES pH 4.25
-0.4
+0.6
-0.0
-0.1
-0.2
pH
R2A_PIPES pH 4.5
-0.1
+0.2
-0.1
+0.0
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.2
-0.0
-0.1
+0.4
no stress control
no stress control
-0.1
-0.4
+0.1
+0.4
+0.1
no stress control
no stress control
-0.1
+0.3
-0.1
-0.1
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.2
-0.8
+0.2
+0.1
+0.6
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.2
+0.1
-0.1
+0.0
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.0
+0.1
+0.0
+0.3
-0.1
no stress control
no stress control
+0.2
-0.1
+0.1
+0.1
+0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.3
+0.5
-0.2
-0.4
+0.5
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.0
+0.0
+0.1
+0.3
+0.6
stress
R2A with Zinc chloride 2560 uM
+0.1
-0.2
+0.3
+0.3
+0.4
no stress control
no stress control
+0.2
+0.5
+0.0
-0.1
+0.4
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