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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS11125 and LRK55_RS11130 overlap by 4 nucleotides
LRK55_RS11130 and LRK55_RS11135 are separated by 12 nucleotides
LRK55_RS11135 and LRK55_RS11140 are separated by 454 nucleotides
LRK55_RS11140 and LRK55_RS11145 are separated by 232 nucleotides
LRK55_RS11125: LRK55_RS11125 - proteobacterial dedicated sortase system response regulator, at 2,450,634 to 2,451,323
_RS11125
LRK55_RS11130: LRK55_RS11130 - hypothetical protein, at 2,451,320 to 2,451,901
_RS11130
LRK55_RS11135: LRK55_RS11135 - ATP-binding protein, at 2,451,914 to 2,453,929
_RS11135
LRK55_RS11140: LRK55_RS11140 - hypothetical protein, at 2,454,384 to 2,455,313
_RS11140
LRK55_RS11145: LRK55_RS11145 - anthranilate synthase component I, at 2,455,546 to 2,457,021
_RS11145
Group
Condition
LRK55
_RS11125
LRK55
_RS11130
LRK55
_RS11135
LRK55
_RS11140
LRK55
_RS11145
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.5
-0.3
+0.2
-0.7
-1.6
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
-0.3
-0.6
-0.5
-1.4
pH
R2A_PIPES pH 4.25
+0.4
-0.2
+0.0
-0.9
-1.9
no stress control
no stress control
-0.4
+0.1
-0.2
-0.4
-1.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.7
+0.1
-0.0
-0.4
-1.3
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
-0.1
-0.1
-0.5
-1.4
no stress control
no stress control
-0.1
-0.3
-0.0
-0.4
-1.4
stress
R2A with Nickel (II) chloride 1696 uM
+0.0
+0.0
-0.3
-0.5
-1.4
pH
R2A_PIPES pH 4.25
+0.7
-0.1
-0.6
-0.8
-1.4
no stress control
no stress control
-0.2
-0.0
-0.2
-0.4
-1.1
no stress control
no stress control
-0.5
-0.1
+0.1
-0.2
-1.2
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.0
+0.1
-0.1
-0.5
-1.5
stress
R2A with Zinc chloride 2560 uM
+0.5
-0.0
-0.3
-0.5
-1.6
no stress control
no stress control
-0.2
-0.1
-0.1
-0.2
-1.3
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
-0.0
+0.0
-0.4
-1.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
-0.0
+0.0
-0.5
-1.4
pH
R2A_PIPES pH 4.5
+0.4
-0.0
-0.0
-0.6
-1.4
no stress control
no stress control
+0.3
-0.1
-0.3
-0.4
-1.1
no stress control
no stress control
-0.2
-0.0
+0.1
-0.3
-1.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.3
-0.3
+0.1
-0.5
-1.2
pH
R2A_PIPES pH 4.5
+0.4
-0.1
+0.1
-0.6
-1.4
stress
R2A with Zinc chloride 2560 uM
+0.2
-0.1
+0.2
-0.3
-1.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.6
+0.1
-0.1
-0.3
-1.3
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