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Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS11095 and LRK55_RS11100 overlap by 4 nucleotides
LRK55_RS11100 and LRK55_RS11105 are separated by 21 nucleotides
LRK55_RS11105 and LRK55_RS11110 are separated by 126 nucleotides
LRK55_RS11110 and LRK55_RS11115 overlap by 4 nucleotides
LRK55_RS11095: LRK55_RS11095 - hypothetical protein, at 2,445,934 to 2,446,341
_RS11095
LRK55_RS11100: LRK55_RS11100 - DUF962 domain-containing protein, at 2,446,338 to 2,446,808
_RS11100
LRK55_RS11105: LRK55_RS11105 - phosphoribosylaminoimidazolesuccinocarboxamide synthase, at 2,446,830 to 2,447,726
_RS11105
LRK55_RS11110: LRK55_RS11110 - c-type cytochrome, at 2,447,853 to 2,448,161
_RS11110
LRK55_RS11115: LRK55_RS11115 - co-chaperone DjlA, at 2,448,158 to 2,448,964
_RS11115
Group
Condition
LRK55
_RS11095
LRK55
_RS11100
LRK55
_RS11105
LRK55
_RS11110
LRK55
_RS11115
stress
R2A with Zinc chloride 2560 uM
-0.5
-0.3
-4.2
-0.2
N.D.
pH
R2A_PIPES pH 4.5
-0.4
-0.1
-4.5
-0.3
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.5
-0.0
-3.9
-0.5
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.5
-0.1
-4.1
-0.0
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
-0.0
-4.0
-0.3
N.D.
no stress control
no stress control
-0.2
-0.1
-3.5
-0.3
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
-0.0
-3.9
+0.0
N.D.
pH
R2A_PIPES pH 4.5
-0.2
+0.1
-4.0
+0.0
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.3
-0.1
-3.1
-0.5
N.D.
no stress control
no stress control
-0.0
-0.0
-3.9
+0.1
N.D.
pH
R2A_PIPES pH 4.25
+0.0
-0.2
-3.8
+0.1
N.D.
no stress control
no stress control
-0.2
-0.3
-3.4
-0.0
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
-0.3
-0.1
-3.2
-0.1
N.D.
stress
R2A with Zinc chloride 2560 uM
-0.5
-0.0
-2.8
-0.4
N.D.
no stress control
no stress control
-0.0
+0.0
-3.8
+0.2
N.D.
pH
R2A_PIPES pH 4.25
-0.3
-0.3
-3.3
+0.3
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.3
+0.0
-3.9
-0.0
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.3
+0.0
-4.0
+0.3
N.D.
no stress control
no stress control
-0.1
+0.1
-3.6
+0.3
N.D.
no stress control
no stress control
-0.0
+0.1
-3.4
-0.1
N.D.
no stress control
no stress control
+0.2
-0.1
-3.6
+0.1
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
-0.1
-3.0
-0.1
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
-0.0
-2.9
-0.2
N.D.
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