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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS11015 and LRK55_RS11020 are separated by 179 nucleotides
LRK55_RS11020 and LRK55_RS11025 are separated by 14 nucleotides
LRK55_RS11025 and LRK55_RS11030 are separated by 49 nucleotides
LRK55_RS11030 and LRK55_RS11035 are separated by 15 nucleotides
LRK55_RS11015: LRK55_RS11015 - ABC transporter ATP-binding protein, at 2,429,848 to 2,430,735
_RS11015
LRK55_RS11020: LRK55_RS11020 - dihydrolipoyllysine-residue acetyltransferase, at 2,430,915 to 2,432,345
_RS11020
LRK55_RS11025: LRK55_RS11025 - dihydrolipoyl dehydrogenase, at 2,432,360 to 2,434,210
_RS11025
LRK55_RS11030: LRK55_RS11030 - 4-hydroxy-tetrahydrodipicolinate reductase, at 2,434,260 to 2,435,060
_RS11030
LRK55_RS11035: LRK55_RS11035 - hypothetical protein, at 2,435,076 to 2,435,768
_RS11035
Group
Condition
LRK55
_RS11015
LRK55
_RS11020
LRK55
_RS11025
LRK55
_RS11030
LRK55
_RS11035
stress
R2A with Nickel (II) chloride 1696 uM
-0.5
-3.6
-3.5
+0.1
-0.6
pH
R2A_PIPES pH 4.5
-0.7
-3.7
-3.1
-0.2
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
-1.2
-3.3
-2.8
-0.1
+0.1
stress
R2A with Zinc chloride 2560 uM
-0.5
-2.3
-4.0
-0.2
-0.0
stress
R2A with Zinc chloride 2560 uM
-0.9
-3.1
-2.7
+0.1
-0.3
pH
R2A_PIPES pH 4.25
-0.9
-2.8
-3.5
+0.4
+0.0
no stress control
no stress control
-0.6
-3.6
-3.2
+0.3
+0.4
no stress control
no stress control
-0.8
-2.1
-4.1
+0.5
+0.3
pH
R2A_PIPES pH 4.5
-0.2
-3.4
-2.5
+0.1
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
-3.2
-3.2
+0.2
+0.2
pH
R2A_PIPES pH 4.25
-0.7
-3.2
-2.3
+0.4
+0.3
no stress control
no stress control
-0.2
-2.9
-2.2
+0.2
-0.4
no stress control
no stress control
-0.6
-3.5
-1.7
-0.0
+0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.6
-1.9
-3.2
-0.0
+0.5
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.6
-2.0
-1.8
+0.1
-0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.6
-2.2
-2.5
+0.3
+0.4
no stress control
no stress control
-0.4
-2.7
-1.8
+0.1
+0.4
no stress control
no stress control
-0.0
-2.7
-2.0
-0.1
+0.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.3
-2.4
-1.5
+0.0
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.6
-2.0
-1.7
+0.3
-0.0
no stress control
no stress control
-0.2
-2.5
-1.1
+0.0
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.8
-2.1
-1.5
+0.4
+0.4
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
-1.5
-1.0
+0.2
+0.4
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