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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS10820 and LRK55_RS10825 are separated by 86 nucleotides
LRK55_RS10825 and LRK55_RS10830 are separated by 3 nucleotides
LRK55_RS10830 and LRK55_RS10835 are separated by 31 nucleotides
LRK55_RS10835 and LRK55_RS10840 are separated by 118 nucleotides
LRK55_RS10820: LRK55_RS10820 - TonB-dependent receptor, at 2,384,231 to 2,387,185
_RS10820
LRK55_RS10825: LRK55_RS10825 - tetratricopeptide repeat-containing sulfotransferase family protein, at 2,387,272 to 2,389,101
_RS10825
LRK55_RS10830: LRK55_RS10830 - sulfotransferase, at 2,389,105 to 2,390,640
_RS10830
LRK55_RS10835: LRK55_RS10835 - tetratricopeptide repeat-containing sulfotransferase family protein, at 2,390,672 to 2,392,249
_RS10835
LRK55_RS10840: LRK55_RS10840 - aspartyl/asparaginyl beta-hydroxylase domain-containing protein, at 2,392,368 to 2,393,693
_RS10840
Group
Condition
LRK55
_RS10820
LRK55
_RS10825
LRK55
_RS10830
LRK55
_RS10835
LRK55
_RS10840
pH
R2A_PIPES pH 4.25
-1.5
+0.4
+0.1
-1.3
-0.1
pH
R2A_PIPES pH 4.25
-1.4
+0.5
+0.2
-1.0
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.0
-0.1
-0.2
-0.4
+0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.1
-0.1
-0.2
-0.2
+0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.6
+0.3
-0.3
-0.8
+0.0
pH
R2A_PIPES pH 4.5
+0.4
+0.1
-0.2
-0.4
+0.1
pH
R2A_PIPES pH 4.5
+0.4
+0.1
-0.0
-0.4
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.5
+0.2
+0.0
-0.5
+0.1
no stress control
no stress control
+0.3
+0.2
-0.1
-0.2
+0.2
no stress control
no stress control
+0.4
+0.1
+0.1
-0.2
+0.2
no stress control
no stress control
+0.4
+0.2
-0.2
-0.1
+0.2
no stress control
no stress control
+0.4
+0.2
+0.1
-0.3
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
+0.3
+0.4
-0.0
-0.2
+0.3
no stress control
no stress control
+0.4
+0.3
+0.1
-0.1
+0.2
no stress control
no stress control
+0.4
+0.3
+0.3
-0.2
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
+0.5
+0.5
+0.1
-0.3
+0.2
no stress control
no stress control
+0.4
+0.3
+0.3
-0.0
+0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+1.9
+0.9
+0.1
-0.8
+0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+1.6
+1.0
+0.1
-0.7
+0.3
stress
R2A with Zinc chloride 2560 uM
+2.1
+1.1
+0.3
-0.8
+0.2
stress
R2A with Zinc chloride 2560 uM
+2.4
+1.2
-0.0
-0.7
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+2.3
+0.7
+0.2
-0.1
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+3.0
+0.9
+0.1
-0.0
+0.4
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