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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS10765 and LRK55_RS10770 are separated by 27 nucleotides
LRK55_RS10770 and LRK55_RS10775 overlap by 14 nucleotides
LRK55_RS10775 and LRK55_RS10780 are separated by 21 nucleotides
LRK55_RS10780 and LRK55_RS10785 are separated by 401 nucleotides
LRK55_RS10765: LRK55_RS10765 - twin-arginine translocase TatA/TatE family subunit, at 2,371,969 to 2,372,205
_RS10765
LRK55_RS10770: LRK55_RS10770 - Sec-independent protein translocase protein TatB, at 2,372,233 to 2,372,676
_RS10770
LRK55_RS10775: LRK55_RS10775 - twin-arginine translocase subunit TatC, at 2,372,663 to 2,373,421
_RS10775
LRK55_RS10780: LRK55_RS10780 - primosomal protein N', at 2,373,443 to 2,375,617
_RS10780
LRK55_RS10785: LRK55_RS10785 - DUF3667 domain-containing protein, at 2,376,019 to 2,377,221
_RS10785
Group
Condition
LRK55
_RS10765
LRK55
_RS10770
LRK55
_RS10775
LRK55
_RS10780
LRK55
_RS10785
no stress control
no stress control
N.D.
N.D.
N.D.
N.D.
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
N.D.
N.D.
-0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
N.D.
N.D.
-0.0
pH
R2A_PIPES pH 4.5
N.D.
N.D.
N.D.
N.D.
-0.0
pH
R2A_PIPES pH 4.25
N.D.
N.D.
N.D.
N.D.
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
N.D.
N.D.
+0.0
no stress control
no stress control
N.D.
N.D.
N.D.
N.D.
+0.0
pH
R2A_PIPES pH 4.5
N.D.
N.D.
N.D.
N.D.
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
N.D.
N.D.
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
N.D.
N.D.
+0.1
no stress control
no stress control
N.D.
N.D.
N.D.
N.D.
+0.1
pH
R2A_PIPES pH 4.25
N.D.
N.D.
N.D.
N.D.
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
N.D.
N.D.
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
N.D.
N.D.
+0.2
no stress control
no stress control
N.D.
N.D.
N.D.
N.D.
+0.2
no stress control
no stress control
N.D.
N.D.
N.D.
N.D.
+0.2
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
N.D.
N.D.
+0.2
no stress control
no stress control
N.D.
N.D.
N.D.
N.D.
+0.2
no stress control
no stress control
N.D.
N.D.
N.D.
N.D.
+0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
N.D.
+0.4
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