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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS10625 and LRK55_RS10630 are separated by 111 nucleotides
LRK55_RS10630 and LRK55_RS10635 overlap by 4 nucleotides
LRK55_RS10635 and LRK55_RS10640 are separated by 140 nucleotides
LRK55_RS10640 and LRK55_RS10645 overlap by 4 nucleotides
LRK55_RS10625: LRK55_RS10625 - DEAD/DEAH box helicase, at 2,336,867 to 2,338,615
_RS10625
LRK55_RS10630: LRK55_RS10630 - cell division ATP-binding protein FtsE, at 2,338,727 to 2,339,404
_RS10630
LRK55_RS10635: LRK55_RS10635 - permease-like cell division protein FtsX, at 2,339,401 to 2,340,381
_RS10635
LRK55_RS10640: LRK55_RS10640 - response regulator, at 2,340,522 to 2,341,364
_RS10640
LRK55_RS10645: LRK55_RS10645 - uracil-DNA glycosylase, at 2,341,361 to 2,342,083
_RS10645
Group
Condition
LRK55
_RS10625
LRK55
_RS10630
LRK55
_RS10635
LRK55
_RS10640
LRK55
_RS10645
pH
R2A_PIPES pH 4.5
-1.7
N.D.
N.D.
-0.3
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-1.5
N.D.
N.D.
-0.4
+0.0
no stress control
no stress control
-1.3
N.D.
N.D.
-0.4
+0.0
no stress control
no stress control
-1.3
N.D.
N.D.
-0.5
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-1.1
N.D.
N.D.
-0.4
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-1.5
N.D.
N.D.
-0.3
+0.3
pH
R2A_PIPES pH 4.5
-1.7
N.D.
N.D.
-0.1
+0.3
no stress control
no stress control
-1.2
N.D.
N.D.
-0.0
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-1.0
N.D.
N.D.
-0.6
+0.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.7
N.D.
N.D.
-0.4
-0.2
no stress control
no stress control
-1.1
N.D.
N.D.
-0.1
+0.0
no stress control
no stress control
-0.9
N.D.
N.D.
-0.1
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.6
N.D.
N.D.
-0.3
+0.0
pH
R2A_PIPES pH 4.25
-1.0
N.D.
N.D.
+0.0
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.9
N.D.
N.D.
-0.2
+0.4
no stress control
no stress control
-1.0
N.D.
N.D.
-0.0
+0.3
pH
R2A_PIPES pH 4.25
-0.9
N.D.
N.D.
-0.1
+0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.7
N.D.
N.D.
-0.2
+0.1
no stress control
no stress control
-1.1
N.D.
N.D.
+0.1
+0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.8
N.D.
N.D.
+0.1
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.7
N.D.
N.D.
-0.2
+0.3
stress
R2A with Zinc chloride 2560 uM
+0.4
N.D.
N.D.
-0.1
-0.1
stress
R2A with Zinc chloride 2560 uM
+0.8
N.D.
N.D.
-0.3
+0.0
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