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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Number of genes on each side:
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS10485 and LRK55_RS10490 overlap by 4 nucleotides
LRK55_RS10490 and LRK55_RS10495 are separated by 396 nucleotides
LRK55_RS10495 and LRK55_RS10500 are separated by 22 nucleotides
LRK55_RS10500 and LRK55_RS10505 are separated by 9 nucleotides
LRK55_RS10485: LRK55_RS10485 - hypothetical protein, at 2,310,682 to 2,311,359
_RS10485
LRK55_RS10490: LRK55_RS10490 - hypothetical protein, at 2,311,356 to 2,312,159
_RS10490
LRK55_RS10495: LRK55_RS10495 - thymidine kinase, at 2,312,556 to 2,313,188
_RS10495
LRK55_RS10500: LRK55_RS10500 - hypothetical protein, at 2,313,211 to 2,313,978
_RS10500
LRK55_RS10505: LRK55_RS10505 - bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase, at 2,313,988 to 2,314,815
_RS10505
Group
Condition
LRK55
_RS10485
LRK55
_RS10490
LRK55
_RS10495
LRK55
_RS10500
LRK55
_RS10505
stress
R2A with Zinc chloride 2560 uM
-0.6
-0.3
-0.9
-2.4
+0.3
stress
R2A with Zinc chloride 2560 uM
-0.2
-0.4
-0.6
-2.5
+0.6
stress
R2A with Nickel (II) chloride 1696 uM
-0.6
-0.6
-0.6
-1.1
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
-0.2
-0.6
-1.5
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.0
-0.1
-0.7
-1.8
-0.2
pH
R2A_PIPES pH 4.5
-0.4
-0.5
-0.9
-0.9
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
-0.0
-0.6
-1.6
-0.2
pH
R2A_PIPES pH 4.25
-0.8
-0.2
-1.1
-0.4
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.4
-0.4
-0.7
-1.1
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
-0.1
-0.6
-1.4
+0.0
no stress control
no stress control
-0.2
-0.2
-0.6
-0.9
-0.2
no stress control
no stress control
-0.1
-0.2
-0.5
-1.2
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.3
-0.1
-0.7
-0.6
-0.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.4
-0.4
-0.5
-1.2
+0.4
pH
R2A_PIPES pH 4.25
-0.4
-0.2
-1.0
-0.4
-0.0
pH
R2A_PIPES pH 4.5
-0.4
-0.4
-0.7
-0.5
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
-0.0
-0.9
-0.9
-0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.6
-0.2
-0.7
-0.8
+0.4
no stress control
no stress control
-0.5
-0.1
-0.3
-0.8
+0.1
no stress control
no stress control
-0.0
-0.1
-0.5
-0.8
-0.1
no stress control
no stress control
-0.1
+0.1
-0.6
-0.9
-0.1
no stress control
no stress control
-0.3
-0.2
-0.5
-0.8
+0.5
no stress control
no stress control
-0.2
+0.0
-0.4
-0.7
+0.0
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LRK55_RS10495
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