Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS10265 and LRK55_RS10270 are separated by 97 nucleotidesLRK55_RS10270 and LRK55_RS10275 are separated by 102 nucleotidesLRK55_RS10275 and LRK55_RS10280 overlap by 4 nucleotidesLRK55_RS10280 and LRK55_RS10285 are separated by 27 nucleotides LRK55_RS10265: LRK55_RS10265 - alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB, at 2,263,105 to 2,263,527 _RS10265 LRK55_RS10270: LRK55_RS10270 - pseudouridine synthase, at 2,263,625 to 2,264,338 _RS10270 LRK55_RS10275: LRK55_RS10275 - ubiquinone biosynthesis regulatory protein kinase UbiB, at 2,264,441 to 2,266,090 _RS10275 LRK55_RS10280: LRK55_RS10280 - SCP2 sterol-binding domain-containing protein, at 2,266,087 to 2,266,737 _RS10280 LRK55_RS10285: LRK55_RS10285 - tRNA (cytidine(34)-2'-O)-methyltransferase, at 2,266,765 to 2,267,235 _RS10285
Group Condition LRK55_RS10265 LRK55_RS10270 LRK55_RS10275 LRK55_RS10280 LRK55_RS10285
pH R2A_PIPES pH 4.25 N.D. -0.2 N.D. -2.6 -0.1
stress R2A_PIPES with Cadmium chloride 64 uM N.D. -0.1 N.D. -2.7 +0.3
stress R2A with Zinc chloride 2560 uM N.D. -0.0 N.D. -2.6 +0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. -0.2 N.D. -2.1 +0.2
stress R2A with Zinc chloride 2560 uM N.D. +0.3 N.D. -1.9 +0.2
stress R2A_PIPES with Cadmium chloride 64 uM N.D. +0.1 N.D. -2.0 +0.5
no stress control no stress control N.D. +0.1 N.D. -1.8 +0.5
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. -0.1 N.D. -0.9 -0.0
no stress control no stress control N.D. +0.3 N.D. -1.5 +0.2
stress R2A with Nickel (II) chloride 1696 uM N.D. -0.1 N.D. -0.8 +0.2
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. +0.1 N.D. -0.9 +0.3
no stress control no stress control N.D. +0.1 N.D. -0.9 +0.2
stress R2A with Nickel (II) chloride 1696 uM N.D. -0.0 N.D. -0.5 -0.0
no stress control no stress control N.D. +0.1 N.D. -0.6 +0.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. -0.0 N.D. +0.1 -0.3
no stress control no stress control N.D. +0.2 N.D. -0.6 +0.3
no stress control no stress control N.D. +0.2 N.D. -0.5 +0.4
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. +0.3 N.D. -0.2 +0.1
pH R2A_PIPES pH 4.25 N.D. -0.3 N.D. +1.0 -0.5
pH R2A_PIPES pH 4.5 N.D. +0.2 N.D. +0.1 +0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. +0.4 N.D. -0.1 +0.2
no stress control no stress control N.D. +0.2 N.D. +0.4 +0.1
pH R2A_PIPES pH 4.5 N.D. +0.0 N.D. +0.6 +0.4
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