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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS10195 and LRK55_RS10200 are separated by 98 nucleotides
LRK55_RS10200 and LRK55_RS10205 are separated by 456 nucleotides
LRK55_RS10205 and LRK55_RS10210 are separated by 180 nucleotides
LRK55_RS10210 and LRK55_RS10215 are separated by 149 nucleotides
LRK55_RS10195: LRK55_RS10195 - GIY-YIG nuclease family protein, at 2,245,179 to 2,245,475
_RS10195
LRK55_RS10200: LRK55_RS10200 - ribonucleoside-diphosphate reductase subunit alpha, at 2,245,574 to 2,247,994
_RS10200
LRK55_RS10205: LRK55_RS10205 - P-II family nitrogen regulator, at 2,248,451 to 2,248,789
_RS10205
LRK55_RS10210: LRK55_RS10210 - accessory factor UbiK family protein, at 2,248,970 to 2,249,230
_RS10210
LRK55_RS10215: LRK55_RS10215 - YifB family Mg chelatase-like AAA ATPase, at 2,249,380 to 2,250,873
_RS10215
Group
Condition
LRK55
_RS10195
LRK55
_RS10200
LRK55
_RS10205
LRK55
_RS10210
LRK55
_RS10215
pH
R2A_PIPES pH 4.25
-2.2
N.D.
-2.3
-4.2
+0.9
stress
R2A with Zinc chloride 2560 uM
-1.1
N.D.
-1.1
-1.3
-1.6
stress
R2A with Zinc chloride 2560 uM
-0.5
N.D.
-0.7
-2.3
-1.3
pH
R2A_PIPES pH 4.25
-0.7
N.D.
-1.5
-3.1
+1.0
stress
R2A with Nickel (II) chloride 1696 uM
-0.7
N.D.
-0.3
-2.4
-0.8
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-1.0
N.D.
-0.9
-2.4
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-1.6
N.D.
-0.5
-2.4
+1.1
pH
R2A_PIPES pH 4.5
-1.3
N.D.
-0.6
-1.9
+0.5
no stress control
no stress control
-1.5
N.D.
-0.5
-1.9
+0.7
stress
R2A with Nickel (II) chloride 1696 uM
-1.0
N.D.
-0.5
-1.0
-0.5
pH
R2A_PIPES pH 4.5
-0.9
N.D.
-1.0
-1.5
+0.5
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.9
N.D.
-0.4
-0.8
-0.7
no stress control
no stress control
-1.1
N.D.
-0.4
-1.0
+0.3
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.8
N.D.
-0.9
-1.8
+1.3
no stress control
no stress control
-1.2
N.D.
-1.1
-0.9
+1.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-1.0
N.D.
-0.4
-0.6
-0.2
no stress control
no stress control
-0.9
N.D.
-0.7
-0.8
+0.2
no stress control
no stress control
-0.8
N.D.
-0.5
-1.1
+0.3
no stress control
no stress control
-1.0
N.D.
-0.3
-0.9
+0.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.6
N.D.
-0.5
-1.1
+0.6
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.7
N.D.
-0.4
-1.2
+0.7
no stress control
no stress control
-0.7
N.D.
-0.0
-0.6
+0.5
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.6
N.D.
-0.3
-0.1
+0.4
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