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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS09990 and LRK55_RS09995 are separated by 119 nucleotides
LRK55_RS09995 and LRK55_RS10000 are separated by 120 nucleotides
LRK55_RS10000 and LRK55_RS10005 overlap by 4 nucleotides
LRK55_RS10005 and LRK55_RS10010 are separated by 406 nucleotides
LRK55_RS09990: LRK55_RS09990 - hypothetical protein, at 2,192,339 to 2,192,476
_RS09990
LRK55_RS09995: LRK55_RS09995 - threonine synthase, at 2,192,596 to 2,193,906
_RS09995
LRK55_RS10000: LRK55_RS10000 - homoserine kinase, at 2,194,027 to 2,195,022
_RS10000
LRK55_RS10005: LRK55_RS10005 - homoserine dehydrogenase, at 2,195,019 to 2,196,164
_RS10005
LRK55_RS10010: LRK55_RS10010 - c-type cytochrome, at 2,196,571 to 2,197,347
_RS10010
Group
Condition
LRK55
_RS09990
LRK55
_RS09995
LRK55
_RS10000
LRK55
_RS10005
LRK55
_RS10010
pH
R2A_PIPES pH 4.5
-0.5
-2.1
N.D.
-0.1
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.0
-2.0
N.D.
-0.6
-0.0
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
-2.0
N.D.
-0.1
+0.1
no stress control
no stress control
-0.7
-0.7
N.D.
-0.4
+0.0
pH
R2A_PIPES pH 4.5
+0.1
-1.6
N.D.
+0.0
+0.1
stress
R2A with Zinc chloride 2560 uM
-0.1
-1.5
N.D.
+0.1
+0.0
pH
R2A_PIPES pH 4.25
-0.6
-1.4
N.D.
+0.3
+0.4
pH
R2A_PIPES pH 4.25
-0.3
-1.5
N.D.
+0.3
+0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.3
-0.8
N.D.
-0.1
+0.1
no stress control
no stress control
-0.4
-0.7
N.D.
+0.2
-0.0
stress
R2A with Zinc chloride 2560 uM
-0.1
-1.1
N.D.
+0.1
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.5
N.D.
-0.3
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.2
-1.2
N.D.
+0.4
+0.2
no stress control
no stress control
-0.3
-0.5
N.D.
+0.1
+0.0
no stress control
no stress control
-0.3
-0.8
N.D.
+0.5
+0.1
no stress control
no stress control
-0.2
-0.3
N.D.
+0.0
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.1
-0.7
N.D.
+0.2
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
+0.1
N.D.
+0.2
+0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
+0.1
N.D.
+0.2
+0.1
no stress control
no stress control
-0.0
-0.1
N.D.
+0.3
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.7
+0.5
N.D.
+0.4
-0.0
no stress control
no stress control
-0.2
-0.4
N.D.
+0.7
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
+0.4
N.D.
+0.3
-0.0
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