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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS09835 and LRK55_RS09840 are separated by 83 nucleotides
LRK55_RS09840 and LRK55_RS09845 are separated by 70 nucleotides
LRK55_RS09845 and LRK55_RS09850 overlap by 1 nucleotides
LRK55_RS09850 and LRK55_RS09855 are separated by 13 nucleotides
LRK55_RS09835: LRK55_RS09835 - hypothetical protein, at 2,156,889 to 2,157,074
_RS09835
LRK55_RS09840: LRK55_RS09840 - aminopeptidase N, at 2,157,158 to 2,159,812
_RS09840
LRK55_RS09845: LRK55_RS09845 - aldose 1-epimerase, at 2,159,883 to 2,160,884
_RS09845
LRK55_RS09850: LRK55_RS09850 - pyridoxal-phosphate dependent enzyme, at 2,160,884 to 2,161,831
_RS09850
LRK55_RS09855: LRK55_RS09855 - sterol desaturase family protein, at 2,161,845 to 2,162,963
_RS09855
Group
Condition
LRK55
_RS09835
LRK55
_RS09840
LRK55
_RS09845
LRK55
_RS09850
LRK55
_RS09855
pH
R2A_PIPES pH 4.25
-1.6
+0.3
+0.3
-0.3
-1.5
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.6
-0.2
-0.2
-0.5
-0.5
stress
R2A with Zinc chloride 2560 uM
-0.6
+0.2
+0.2
-0.3
-0.6
no stress control
no stress control
-0.3
+0.0
+0.1
-0.1
-0.7
pH
R2A_PIPES pH 4.5
-0.1
+0.0
+0.0
-0.3
-0.6
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.4
-0.1
-0.6
-0.7
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.6
-0.2
+0.2
+0.1
-0.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.2
-0.1
+0.0
-0.5
-0.5
pH
R2A_PIPES pH 4.5
-0.2
+0.0
+0.2
-0.3
-0.6
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.5
-0.1
-0.1
-0.5
-0.6
no stress control
no stress control
+0.1
+0.0
-0.0
-0.3
-0.5
no stress control
no stress control
+0.0
+0.1
-0.1
-0.2
-0.5
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
+0.0
+0.1
-0.2
-0.3
no stress control
no stress control
+0.4
-0.1
-0.0
+0.1
-0.7
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.3
+0.2
+0.2
-0.5
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
+0.6
+0.2
-0.3
-0.6
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
+0.0
+0.1
-0.1
-0.2
stress
R2A with Zinc chloride 2560 uM
-0.1
+0.2
+0.3
+0.3
-0.6
no stress control
no stress control
-0.0
+0.2
-0.0
+0.4
-0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.3
+0.1
+0.1
-0.2
no stress control
no stress control
-0.2
+0.2
+0.2
+0.5
-0.4
no stress control
no stress control
+0.3
+0.2
+0.2
+0.3
-0.3
pH
R2A_PIPES pH 4.25
+0.1
+0.5
+0.6
+0.4
-1.0
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