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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS09820 and LRK55_RS09825 are separated by 147 nucleotides
LRK55_RS09825 and LRK55_RS09830 are separated by 60 nucleotides
LRK55_RS09830 and LRK55_RS09835 are separated by 594 nucleotides
LRK55_RS09835 and LRK55_RS09840 are separated by 83 nucleotides
LRK55_RS09820: LRK55_RS09820 - Tex family protein, at 2,151,108 to 2,153,435
_RS09820
LRK55_RS09825: LRK55_RS09825 - RDD family protein, at 2,153,583 to 2,154,356
_RS09825
LRK55_RS09830: LRK55_RS09830 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG, at 2,154,417 to 2,156,294
_RS09830
LRK55_RS09835: LRK55_RS09835 - hypothetical protein, at 2,156,889 to 2,157,074
_RS09835
LRK55_RS09840: LRK55_RS09840 - aminopeptidase N, at 2,157,158 to 2,159,812
_RS09840
Group
Condition
LRK55
_RS09820
LRK55
_RS09825
LRK55
_RS09830
LRK55
_RS09835
LRK55
_RS09840
pH
R2A_PIPES pH 4.25
-1.3
-2.5
-0.7
-1.6
+0.3
stress
R2A_PIPES with Cadmium chloride 64 uM
-1.4
-1.3
-0.6
-0.6
-0.2
stress
R2A with Zinc chloride 2560 uM
-1.0
-2.1
-0.5
-0.6
+0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-1.2
-1.6
-0.5
-0.6
-0.2
stress
R2A with Zinc chloride 2560 uM
-1.0
-2.2
-0.6
-0.1
+0.2
pH
R2A_PIPES pH 4.5
-1.0
-1.8
+0.0
-0.2
+0.0
pH
R2A_PIPES pH 4.5
-0.7
-1.9
-0.1
-0.1
+0.0
no stress control
no stress control
-0.8
-1.0
-0.4
-0.3
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
-0.8
-1.7
+0.0
+0.2
+0.0
pH
R2A_PIPES pH 4.25
-0.8
-1.8
-0.1
+0.1
+0.5
no stress control
no stress control
-1.0
-1.0
-0.2
+0.0
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.7
-1.9
+0.3
+0.2
+0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.9
-1.1
-0.2
+0.2
-0.1
no stress control
no stress control
-0.7
-1.0
-0.2
+0.1
+0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-1.0
-1.3
-0.0
+0.5
-0.1
no stress control
no stress control
-0.5
-1.2
+0.1
-0.2
+0.2
no stress control
no stress control
-0.6
-0.9
-0.1
-0.0
+0.2
no stress control
no stress control
-0.8
-1.0
-0.1
+0.4
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.5
-1.1
-0.2
+0.1
+0.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.5
-1.1
+0.0
+0.1
+0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.7
-1.2
+0.2
+0.3
+0.2
no stress control
no stress control
-0.4
-1.0
-0.0
+0.3
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.4
-1.3
-0.0
-0.0
+0.6
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