Fitness for 5 genes in Rhodanobacter denitrificans MT42

Add gene:

Number of genes on each side:  

Top 23 experiments (either direction), sorted by average fitness

Or view all 23 experiments or choose conditions or try the comparative fitness browser

500 ntLRK55_RS09780 and LRK55_RS09785 are separated by 92 nucleotidesLRK55_RS09785 and LRK55_RS09790 are separated by 121 nucleotidesLRK55_RS09790 and LRK55_RS09795 are separated by 0 nucleotidesLRK55_RS09795 and LRK55_RS09800 are separated by 136 nucleotides LRK55_RS09780: LRK55_RS09780 - LysM domain-containing protein, at 2,139,481 to 2,140,602 _RS09780 LRK55_RS09785: LRK55_RS09785 - DNA-processing protein DprA, at 2,140,695 to 2,141,870 _RS09785 LRK55_RS09790: LRK55_RS09790 - DNA topoisomerase I, at 2,141,992 to 2,144,493 _RS09790 LRK55_RS09795: LRK55_RS09795 - Sua5/YciO/YrdC/YwlC family protein, at 2,144,494 to 2,145,066 _RS09795 LRK55_RS09800: LRK55_RS09800 - AMP-binding protein, at 2,145,203 to 2,146,582 _RS09800
Group Condition LRK55_RS09780 LRK55_RS09785 LRK55_RS09790 LRK55_RS09795 LRK55_RS09800
pH R2A_PIPES pH 4.25 +0.2 +0.4 N.D. N.D. -4.4
pH R2A_PIPES pH 4.25 +0.4 +1.0 N.D. N.D. -4.0
pH R2A_PIPES pH 4.5 +0.0 +0.0 N.D. N.D. -1.1
no stress control no stress control +0.0 -0.5 N.D. N.D. -0.4
stress R2A_PIPES with Cadmium chloride 64 uM +0.2 -0.6 N.D. N.D. -0.3
no stress control no stress control +0.0 -0.7 N.D. N.D. -0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.3 -0.2 N.D. N.D. -0.7
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.2 -0.2 N.D. N.D. -0.7
no stress control no stress control +0.1 -0.5 N.D. N.D. -0.2
pH R2A_PIPES pH 4.5 +0.1 +0.3 N.D. N.D. -0.9
stress R2A with Zinc chloride 2560 uM +0.1 -0.1 N.D. N.D. -0.4
no stress control no stress control +0.2 -0.5 N.D. N.D. -0.1
stress R2A with Zinc chloride 2560 uM +0.2 +0.1 N.D. N.D. -0.4
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.1 +0.1 N.D. N.D. -0.2
no stress control no stress control +0.1 +0.0 N.D. N.D. -0.2
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.1 -0.0 N.D. N.D. -0.2
no stress control no stress control +0.2 -0.1 N.D. N.D. -0.0
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.0 +0.2 N.D. N.D. -0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.2 +0.0 N.D. N.D. -0.1
stress R2A with Nickel (II) chloride 1696 uM +0.1 -0.3 N.D. N.D. +0.4
no stress control no stress control +0.1 +0.2 N.D. N.D. -0.1
stress R2A_PIPES with Cadmium chloride 64 uM +0.5 +0.2 N.D. N.D. -0.3
stress R2A with Nickel (II) chloride 1696 uM +0.2 +0.2 N.D. N.D. +0.4
remove
LRK55_RS09780
plot
remove
LRK55_RS09785
plot
remove
LRK55_RS09790
remove
LRK55_RS09795
plot
remove
LRK55_RS09800
plot