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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS09725 and LRK55_RS09730 overlap by 1 nucleotides
LRK55_RS09730 and LRK55_RS09735 are separated by 173 nucleotides
LRK55_RS09735 and LRK55_RS09740 overlap by 4 nucleotides
LRK55_RS09740 and LRK55_RS09745 are separated by 10 nucleotides
LRK55_RS09725: LRK55_RS09725 - CDP-glycerol glycerophosphotransferase family protein, at 2,127,588 to 2,128,631
_RS09725
LRK55_RS09730: LRK55_RS09730 - glycosyltransferase family 2 protein, at 2,128,631 to 2,129,446
_RS09730
LRK55_RS09735: LRK55_RS09735 - SDR family oxidoreductase, at 2,129,620 to 2,130,570
_RS09735
LRK55_RS09740: LRK55_RS09740 - glycosyltransferase family 2 protein, at 2,130,567 to 2,131,493
_RS09740
LRK55_RS09745: LRK55_RS09745 - glycosyltransferase family 2 protein, at 2,131,504 to 2,132,340
_RS09745
Group
Condition
LRK55
_RS09725
LRK55
_RS09730
LRK55
_RS09735
LRK55
_RS09740
LRK55
_RS09745
pH
R2A_PIPES pH 4.25
-0.9
-1.4
+0.3
-0.4
-2.6
pH
R2A_PIPES pH 4.25
-0.5
-1.4
-0.1
-0.1
-2.3
stress
R2A_PIPES with Cadmium chloride 64 uM
-1.6
-0.5
-0.2
-0.1
-0.5
stress
R2A_PIPES with Cadmium chloride 64 uM
-1.3
-0.5
+0.0
-0.0
-0.3
no stress control
no stress control
+0.2
+0.0
-0.3
-0.1
-0.0
no stress control
no stress control
+0.2
-0.0
-0.0
-0.1
-0.2
no stress control
no stress control
+0.4
-0.0
-0.0
-0.1
-0.0
pH
R2A_PIPES pH 4.5
+0.4
+0.2
-0.2
+0.1
-0.2
no stress control
no stress control
+0.4
+0.1
+0.2
+0.1
-0.3
no stress control
no stress control
+0.4
+0.0
+0.2
-0.1
-0.0
pH
R2A_PIPES pH 4.5
+0.3
+0.2
-0.1
+0.0
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
+0.1
+0.1
+0.1
-0.0
no stress control
no stress control
+0.2
+0.2
+0.0
+0.0
+0.0
no stress control
no stress control
+0.3
+0.1
+0.1
+0.1
-0.0
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
+0.2
+0.1
+0.2
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.2
+0.2
+0.2
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.3
+0.2
+0.1
+0.2
-0.1
stress
R2A with Zinc chloride 2560 uM
+0.6
+0.2
+0.2
+0.3
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.5
+0.3
+0.1
+0.3
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.5
+0.3
+0.3
+0.3
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.5
+0.2
+0.3
+0.3
+0.2
stress
R2A with Zinc chloride 2560 uM
+0.5
+0.4
+0.1
+0.3
+0.3
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.5
+0.2
+0.4
+0.4
+0.2
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