Fitness for 5 genes in Rhodanobacter denitrificans MT42

Add gene:

Number of genes on each side:  

Top 23 experiments (either direction), sorted by average fitness

Or view all 23 experiments or choose conditions or try the comparative fitness browser

500 ntLRK55_RS09550 and LRK55_RS09555 are separated by 124 nucleotidesLRK55_RS09555 and LRK55_RS09560 are separated by 82 nucleotidesLRK55_RS09560 and LRK55_RS09565 are separated by 106 nucleotidesLRK55_RS09565 and LRK55_RS09570 are separated by 109 nucleotides LRK55_RS09550: LRK55_RS09550 - NADP-dependent isocitrate dehydrogenase, at 2,087,511 to 2,089,736 _RS09550 LRK55_RS09555: LRK55_RS09555 - TraB/GumN family protein, at 2,089,861 to 2,090,862 _RS09555 LRK55_RS09560: LRK55_RS09560 - aldo/keto reductase, at 2,090,945 to 2,091,889 _RS09560 LRK55_RS09565: LRK55_RS09565 - hypothetical protein, at 2,091,996 to 2,092,199 _RS09565 LRK55_RS09570: LRK55_RS09570 - LysR substrate-binding domain-containing protein, at 2,092,309 to 2,093,229 _RS09570
Group Condition LRK55_RS09550 LRK55_RS09555 LRK55_RS09560 LRK55_RS09565 LRK55_RS09570
stress R2A with Zinc chloride 2560 uM +0.0 -0.2 -0.0 N.D. -0.4
no stress control no stress control -0.1 -0.3 -0.2 N.D. +0.1
stress R2A_PIPES with Cadmium chloride 64 uM -0.5 -0.1 +0.1 N.D. +0.1
no stress control no stress control -0.1 -0.1 -0.2 N.D. +0.0
stress R2A with Zinc chloride 2560 uM -0.0 -0.3 -0.1 N.D. +0.1
pH R2A_PIPES pH 4.5 -0.3 +0.1 +0.1 N.D. -0.2
stress R2A with Nickel (II) chloride 1696 uM -0.1 -0.1 -0.0 N.D. -0.1
no stress control no stress control -0.1 -0.1 -0.0 N.D. -0.1
no stress control no stress control -0.2 -0.2 -0.1 N.D. +0.2
no stress control no stress control -0.1 -0.2 -0.1 N.D. +0.2
no stress control no stress control +0.1 -0.2 -0.0 N.D. -0.0
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.0 +0.0 +0.0 N.D. -0.2
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.2 +0.1 -0.3 N.D. -0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.0 -0.0 +0.2 N.D. -0.3
stress R2A_PIPES with Cadmium chloride 64 uM -0.2 -0.2 +0.3 N.D. -0.0
pH R2A_PIPES pH 4.5 -0.3 +0.1 -0.0 N.D. +0.1
stress R2A with Nickel (II) chloride 1696 uM +0.0 -0.1 -0.1 N.D. +0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.0 -0.1 +0.2 N.D. -0.1
no stress control no stress control +0.2 -0.0 -0.0 N.D. +0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 -0.0 +0.1 N.D. +0.0
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.3 -0.1 +0.2 N.D. +0.2
pH R2A_PIPES pH 4.25 -0.2 +1.4 +0.1 N.D. +0.1
pH R2A_PIPES pH 4.25 -0.2 +1.5 +0.4 N.D. +0.3
remove
LRK55_RS09550
plot		 remove
LRK55_RS09555
plot		 remove
LRK55_RS09560		 remove
LRK55_RS09565
plot		 remove
LRK55_RS09570
plot