Fitness for 5 genes in Rhodanobacter denitrificans MT42

Add gene:

Number of genes on each side:  

Top 23 experiments (either direction), sorted by average fitness

Or view all 23 experiments or choose conditions or try the comparative fitness browser

500 ntLRK55_RS09210 and LRK55_RS09215 are separated by 288 nucleotidesLRK55_RS09215 and LRK55_RS09220 are separated by 139 nucleotidesLRK55_RS09220 and LRK55_RS09225 are separated by 115 nucleotidesLRK55_RS09225 and LRK55_RS09230 are separated by 122 nucleotides LRK55_RS09210: LRK55_RS09210 - hypothetical protein, at 2,019,716 to 2,020,285 _RS09210 LRK55_RS09215: LRK55_RS09215 - AraC family transcriptional regulator, at 2,020,574 to 2,021,428 _RS09215 LRK55_RS09220: LRK55_RS09220 - carboxymuconolactone decarboxylase family protein, at 2,021,568 to 2,022,125 _RS09220 LRK55_RS09225: LRK55_RS09225 - EthD family reductase, at 2,022,241 to 2,022,561 _RS09225 LRK55_RS09230: LRK55_RS09230 - hypothetical protein, at 2,022,684 to 2,023,103 _RS09230
Group Condition LRK55_RS09210 LRK55_RS09215 LRK55_RS09220 LRK55_RS09225 LRK55_RS09230
pH R2A_PIPES pH 4.25 -0.2 +0.0 -1.9 +0.4 +0.2
stress R2A with Nickel (II) chloride 1696 uM +0.1 -0.1 -1.2 -0.0 -0.0
pH R2A_PIPES pH 4.25 -0.2 -0.4 -0.9 -0.1 +0.4
no stress control no stress control +0.1 -0.2 -0.4 -0.3 -0.2
no stress control no stress control +0.2 -0.2 -0.2 -0.2 -0.4
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.1 -0.1 -0.6 +0.0 -0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.3 -0.2 -1.1 +0.2 +0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 +0.2 -0.5 +0.2 -0.6
pH R2A_PIPES pH 4.5 +0.0 -0.1 -0.3 +0.1 -0.1
no stress control no stress control -0.1 -0.1 -0.3 +0.1 -0.1
stress R2A_PIPES with Cadmium chloride 64 uM +0.1 -0.2 -0.4 -0.0 +0.0
no stress control no stress control +0.1 +0.1 -0.1 -0.1 -0.4
stress R2A with Zinc chloride 2560 uM -0.0 +0.2 -0.2 +0.1 -0.3
stress R2A with Nickel (II) chloride 1696 uM +0.1 +0.1 -0.5 -0.1 +0.1
stress R2A_PIPES with Cadmium chloride 64 uM +0.1 +0.2 -0.2 +0.1 -0.2
stress R2A with Zinc chloride 2560 uM +0.1 -0.3 +0.1 +0.3 -0.3
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.1 +0.2 -0.5 +0.2 +0.0
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.5 -0.0 -0.3 +0.1 -0.1
no stress control no stress control +0.2 -0.2 -0.1 +0.3 +0.1
no stress control no stress control +0.3 +0.0 +0.1 +0.1 -0.2
no stress control no stress control +0.4 +0.2 -0.3 +0.1 -0.0
pH R2A_PIPES pH 4.5 +0.3 +0.2 -0.1 +0.3 -0.2
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.2 +0.1 +0.2 +0.2 +0.1
remove
LRK55_RS09210
plot
remove
LRK55_RS09215
plot
remove
LRK55_RS09220
remove
LRK55_RS09225
plot
remove
LRK55_RS09230
plot