Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS09030 and LRK55_RS09035 are separated by 31 nucleotidesLRK55_RS09035 and LRK55_RS09040 are separated by 182 nucleotidesLRK55_RS09040 and LRK55_RS09045 are separated by 9 nucleotidesLRK55_RS09045 and LRK55_RS09050 are separated by 363 nucleotides LRK55_RS09030: LRK55_RS09030 - sigma factor, at 1,980,627 to 1,981,889 _RS09030 LRK55_RS09035: LRK55_RS09035 - DNA (cytosine-5-)-methyltransferase, at 1,981,921 to 1,983,483 _RS09035 LRK55_RS09040: LRK55_RS09040 - very short patch repair endonuclease, at 1,983,666 to 1,984,070 _RS09040 LRK55_RS09045: LRK55_RS09045 - IS3 family transposase, at 1,984,080 to 1,985,095 _RS09045 LRK55_RS09050: LRK55_RS09050 - helix-turn-helix transcriptional regulator, at 1,985,459 to 1,985,710 _RS09050
Group Condition LRK55_RS09030 LRK55_RS09035 LRK55_RS09040 LRK55_RS09045 LRK55_RS09050
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.1 -4.2 -0.4 N.D. N.D.
stress R2A with Zinc chloride 2560 uM -0.1 -4.5 -0.1 N.D. N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.1 -4.3 -0.1 N.D. N.D.
pH R2A_PIPES pH 4.5 -0.4 -3.5 -0.7 N.D. N.D.
stress R2A with Zinc chloride 2560 uM -0.2 -4.8 +0.4 N.D. N.D.
pH R2A_PIPES pH 4.25 -0.1 -3.7 -0.7 N.D. N.D.
stress R2A with Nickel (II) chloride 1696 uM -0.4 -3.6 -0.5 N.D. N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.2 -4.2 -0.0 N.D. N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.1 -4.5 +0.2 N.D. N.D.
pH R2A_PIPES pH 4.5 -0.2 -3.6 -0.3 N.D. N.D.
stress R2A_PIPES with Cadmium chloride 64 uM -0.0 -3.9 -0.0 N.D. N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.1 -3.8 -0.1 N.D. N.D.
stress R2A_PIPES with Cadmium chloride 64 uM -0.1 -3.7 +0.1 N.D. N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.1 -4.0 +0.6 N.D. N.D.
pH R2A_PIPES pH 4.25 +0.0 -3.7 +0.3 N.D. N.D.
stress R2A with Nickel (II) chloride 1696 uM -0.2 -3.1 -0.0 N.D. N.D.
no stress control no stress control -0.1 -2.9 +0.1 N.D. N.D.
no stress control no stress control -0.1 -2.2 -0.6 N.D. N.D.
no stress control no stress control -0.2 -2.8 +0.2 N.D. N.D.
no stress control no stress control -0.0 -2.7 +0.2 N.D. N.D.
no stress control no stress control -0.2 -2.3 +0.2 N.D. N.D.
no stress control no stress control -0.1 -1.6 -0.6 N.D. N.D.
no stress control no stress control +0.0 -2.5 +0.2 N.D. N.D.
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LRK55_RS09050
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