Fitness for 5 genes in Rhodanobacter denitrificans MT42

Add gene:

Number of genes on each side:  

Top 23 experiments (either direction), sorted by average fitness

Or view all 23 experiments or choose conditions or try the comparative fitness browser

500 ntLRK55_RS08990 and LRK55_RS08995 are separated by 336 nucleotidesLRK55_RS08995 and LRK55_RS09000 are separated by 9 nucleotidesLRK55_RS09000 and LRK55_RS09005 are separated by 268 nucleotidesLRK55_RS09005 and LRK55_RS09010 overlap by 11 nucleotides LRK55_RS08990: LRK55_RS08990 - AraC family transcriptional regulator, at 1,970,247 to 1,971,107 _RS08990 LRK55_RS08995: LRK55_RS08995 - IS3 family transposase, at 1,971,444 to 1,972,459 _RS08995 LRK55_RS09000: LRK55_RS09000 - hypothetical protein, at 1,972,469 to 1,972,729 _RS09000 LRK55_RS09005: LRK55_RS09005 - AIPR family protein, at 1,972,998 to 1,974,791 _RS09005 LRK55_RS09010: LRK55_RS09010 - PD-(D/E)XK motif protein, at 1,974,781 to 1,975,776 _RS09010
Group Condition LRK55_RS08990 LRK55_RS08995 LRK55_RS09000 LRK55_RS09005 LRK55_RS09010
stress R2A with Zinc chloride 2560 uM +0.1 N.D. -0.6 +0.0 -0.4
stress R2A with Zinc chloride 2560 uM +0.1 N.D. -0.7 -0.1 -0.1
stress R2A with Nickel (II) chloride 1696 uM -0.1 N.D. -0.3 -0.4 -0.0
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.1 N.D. -0.4 -0.1 -0.2
no stress control no stress control +0.0 N.D. -0.4 -0.2 +0.0
pH R2A_PIPES pH 4.5 -0.1 N.D. +0.1 -0.4 -0.1
stress R2A with Nickel (II) chloride 1696 uM -0.1 N.D. -0.3 -0.0 -0.0
pH R2A_PIPES pH 4.25 +0.3 N.D. -0.2 -0.5 -0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.0 N.D. -0.1 -0.2 -0.0
no stress control no stress control -0.0 N.D. +0.0 -0.1 -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.0 N.D. -0.2 -0.1 +0.0
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.0 N.D. -0.0 -0.1 -0.0
no stress control no stress control +0.1 N.D. -0.2 -0.1 +0.1
pH R2A_PIPES pH 4.5 +0.2 N.D. -0.1 -0.2 +0.2
no stress control no stress control +0.2 N.D. -0.0 -0.1 +0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.2 N.D. -0.0 -0.2 +0.2
no stress control no stress control +0.2 N.D. -0.1 -0.2 +0.3
stress R2A_PIPES with Cadmium chloride 64 uM +0.1 N.D. -0.0 -0.0 +0.1
no stress control no stress control +0.2 N.D. +0.1 -0.2 +0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.4 N.D. -0.3 +0.0 +0.2
pH R2A_PIPES pH 4.25 +0.9 N.D. -0.1 -0.1 -0.3
stress R2A_PIPES with Cadmium chloride 64 uM +0.2 N.D. +0.2 +0.2 -0.1
no stress control no stress control +0.1 N.D. +0.1 +0.1 +0.3
remove
LRK55_RS08990
plot		 remove
LRK55_RS08995
plot		 remove
LRK55_RS09000		 remove
LRK55_RS09005
plot		 remove
LRK55_RS09010
plot