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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS08840 and LRK55_RS08845 overlap by 14 nucleotides
LRK55_RS08845 and LRK55_RS08850 are separated by 106 nucleotides
LRK55_RS08850 and LRK55_RS08855 are separated by 128 nucleotides
LRK55_RS08855 and LRK55_RS08860 are separated by 65 nucleotides
LRK55_RS08840: LRK55_RS08840 - polymer-forming cytoskeletal protein, at 1,941,373 to 1,941,804
_RS08840
LRK55_RS08845: LRK55_RS08845 - hypothetical protein, at 1,941,791 to 1,942,546
_RS08845
LRK55_RS08850: LRK55_RS08850 - bacterioferritin, at 1,942,653 to 1,943,123
_RS08850
LRK55_RS08855: LRK55_RS08855 - (2Fe-2S)-binding protein, at 1,943,252 to 1,943,449
_RS08855
LRK55_RS08860: LRK55_RS08860 - RNA pyrophosphohydrolase, at 1,943,515 to 1,944,075
_RS08860
Group
Condition
LRK55
_RS08840
LRK55
_RS08845
LRK55
_RS08850
LRK55
_RS08855
LRK55
_RS08860
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.3
-1.0
N.D.
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.4
-0.8
N.D.
-0.3
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
-0.0
-0.4
N.D.
-0.1
stress
R2A with Zinc chloride 2560 uM
N.D.
+0.1
-0.1
N.D.
-0.4
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
+0.1
-0.1
N.D.
-0.3
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
+0.1
-0.2
N.D.
-0.2
stress
R2A with Zinc chloride 2560 uM
N.D.
+0.4
-0.3
N.D.
-0.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.2
-0.3
N.D.
+0.3
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
+0.0
-0.2
N.D.
+0.1
pH
R2A_PIPES pH 4.5
N.D.
-0.1
-0.1
N.D.
+0.1
no stress control
no stress control
N.D.
+0.1
-0.2
N.D.
-0.0
no stress control
no stress control
N.D.
+0.0
-0.2
N.D.
+0.1
no stress control
no stress control
N.D.
+0.1
-0.2
N.D.
+0.1
pH
R2A_PIPES pH 4.5
N.D.
+0.2
-0.1
N.D.
-0.1
no stress control
no stress control
N.D.
+0.3
-0.3
N.D.
-0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
+0.1
-0.2
N.D.
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
+0.2
-0.1
N.D.
-0.0
no stress control
no stress control
N.D.
+0.3
-0.2
N.D.
+0.0
no stress control
no stress control
N.D.
+0.3
-0.2
N.D.
+0.0
no stress control
no stress control
N.D.
+0.2
-0.0
N.D.
+0.1
pH
R2A_PIPES pH 4.25
N.D.
+0.5
-0.4
N.D.
+0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
+0.5
-0.2
N.D.
+0.3
pH
R2A_PIPES pH 4.25
N.D.
+0.4
+0.2
N.D.
+0.6
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