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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS08805 and LRK55_RS08810 are separated by 276 nucleotides
LRK55_RS08810 and LRK55_RS08815 are separated by 173 nucleotides
LRK55_RS08815 and LRK55_RS08820 are separated by 9 nucleotides
LRK55_RS08820 and LRK55_RS08825 are separated by 62 nucleotides
LRK55_RS08805: LRK55_RS08805 - helix-turn-helix transcriptional regulator, at 1,932,367 to 1,932,930
_RS08805
LRK55_RS08810: LRK55_RS08810 - TonB-dependent receptor, at 1,933,207 to 1,936,233
_RS08810
LRK55_RS08815: LRK55_RS08815 - MFS transporter, at 1,936,407 to 1,938,281
_RS08815
LRK55_RS08820: LRK55_RS08820 - regulatory signaling modulator protein AmpE, at 1,938,291 to 1,939,157
_RS08820
LRK55_RS08825: LRK55_RS08825 - hypothetical protein, at 1,939,220 to 1,939,792
_RS08825
Group
Condition
LRK55
_RS08805
LRK55
_RS08810
LRK55
_RS08815
LRK55
_RS08820
LRK55
_RS08825
pH
R2A_PIPES pH 4.25
-2.6
-3.2
+0.1
-0.7
+0.2
pH
R2A_PIPES pH 4.25
-2.5
-2.8
+0.3
-0.5
+0.3
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.4
-1.9
-0.1
-0.7
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
-1.8
+0.0
-0.9
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
-1.1
-0.2
-0.3
-0.1
no stress control
no stress control
+0.0
-1.2
-0.1
-0.5
+0.1
no stress control
no stress control
+0.0
-1.3
-0.1
-0.1
-0.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.2
-1.4
-0.1
+0.0
+0.1
no stress control
no stress control
-0.1
-1.3
+0.0
+0.1
-0.2
stress
R2A with Zinc chloride 2560 uM
-0.4
-1.0
+0.1
-0.4
+0.2
no stress control
no stress control
+0.2
-1.2
+0.1
-0.4
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
-1.2
+0.0
-0.2
+0.0
no stress control
no stress control
+0.0
-1.2
+0.1
-0.3
+0.1
pH
R2A_PIPES pH 4.5
+0.4
-1.5
-0.1
-0.3
+0.2
stress
R2A with Zinc chloride 2560 uM
-0.4
-1.1
+0.1
-0.2
+0.5
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.0
-1.0
+0.2
-0.1
-0.1
pH
R2A_PIPES pH 4.5
+0.4
-1.4
-0.0
-0.1
+0.2
no stress control
no stress control
+0.2
-1.1
-0.1
-0.2
+0.3
no stress control
no stress control
+0.0
-1.0
+0.0
+0.0
+0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.2
-0.0
-1.0
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
-0.0
+0.2
+0.2
-0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.0
-0.1
+0.1
-0.2
+0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.2
-0.2
+0.1
+0.0
+0.1
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