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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS08790 and LRK55_RS08795 are separated by 97 nucleotides
LRK55_RS08795 and LRK55_RS08800 overlap by 4 nucleotides
LRK55_RS08800 and LRK55_RS08805 are separated by 72 nucleotides
LRK55_RS08805 and LRK55_RS08810 are separated by 276 nucleotides
LRK55_RS08790: LRK55_RS08790 - GspE/PulE family protein, at 1,927,297 to 1,929,129
_RS08790
LRK55_RS08795: LRK55_RS08795 - glycine--tRNA ligase subunit alpha, at 1,929,227 to 1,930,150
_RS08795
LRK55_RS08800: LRK55_RS08800 - glycine--tRNA ligase subunit beta, at 1,930,147 to 1,932,294
_RS08800
LRK55_RS08805: LRK55_RS08805 - helix-turn-helix transcriptional regulator, at 1,932,367 to 1,932,930
_RS08805
LRK55_RS08810: LRK55_RS08810 - TonB-dependent receptor, at 1,933,207 to 1,936,233
_RS08810
Group
Condition
LRK55
_RS08790
LRK55
_RS08795
LRK55
_RS08800
LRK55
_RS08805
LRK55
_RS08810
pH
R2A_PIPES pH 4.25
+0.3
N.D.
N.D.
-2.6
-3.2
pH
R2A_PIPES pH 4.25
+0.5
N.D.
N.D.
-2.5
-2.8
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.2
N.D.
N.D.
-0.4
-1.9
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.3
N.D.
N.D.
-0.1
-1.8
no stress control
no stress control
-0.1
N.D.
N.D.
-0.1
-1.3
stress
R2A with Zinc chloride 2560 uM
-0.0
N.D.
N.D.
-0.4
-1.0
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
N.D.
N.D.
-0.2
-1.4
stress
R2A with Zinc chloride 2560 uM
+0.2
N.D.
N.D.
-0.4
-1.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
N.D.
N.D.
-0.2
-1.1
no stress control
no stress control
+0.0
N.D.
N.D.
+0.0
-1.3
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
N.D.
N.D.
+0.0
-1.0
no stress control
no stress control
+0.1
N.D.
N.D.
+0.0
-1.2
no stress control
no stress control
+0.1
N.D.
N.D.
+0.0
-1.2
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
N.D.
N.D.
+0.1
-1.2
no stress control
no stress control
+0.0
N.D.
N.D.
+0.2
-1.2
pH
R2A_PIPES pH 4.5
+0.1
N.D.
N.D.
+0.4
-1.5
pH
R2A_PIPES pH 4.5
+0.1
N.D.
N.D.
+0.4
-1.4
no stress control
no stress control
+0.1
N.D.
N.D.
+0.0
-1.0
no stress control
no stress control
+0.1
N.D.
N.D.
+0.2
-1.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
N.D.
N.D.
-0.3
-0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
N.D.
N.D.
-0.0
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.2
N.D.
N.D.
+0.2
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.0
N.D.
N.D.
+0.1
+0.2
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