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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS08515 and LRK55_RS08520 are separated by 159 nucleotides
LRK55_RS08520 and LRK55_RS08525 overlap by 4 nucleotides
LRK55_RS08525 and LRK55_RS08530 are separated by 37 nucleotides
LRK55_RS08530 and LRK55_RS08535 overlap by 7 nucleotides
LRK55_RS08515: LRK55_RS08515 - phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent), at 1,860,790 to 1,862,436
_RS08515
LRK55_RS08520: LRK55_RS08520 - glucose-6-phosphate isomerase, at 1,862,596 to 1,864,230
_RS08520
LRK55_RS08525: LRK55_RS08525 - transaldolase, at 1,864,227 to 1,865,321
_RS08525
LRK55_RS08530: LRK55_RS08530 - HAD family hydrolase, at 1,865,359 to 1,866,075
_RS08530
LRK55_RS08535: LRK55_RS08535 - glucose-6-phosphate dehydrogenase, at 1,866,069 to 1,867,475
_RS08535
Group
Condition
LRK55
_RS08515
LRK55
_RS08520
LRK55
_RS08525
LRK55
_RS08530
LRK55
_RS08535
pH
R2A_PIPES pH 4.5
-3.8
N.D.
-2.6
+0.1
+0.0
pH
R2A_PIPES pH 4.25
-3.4
N.D.
-2.7
-0.2
+0.3
stress
R2A_PIPES with Cadmium chloride 64 uM
-3.3
N.D.
-1.9
-0.3
+0.2
pH
R2A_PIPES pH 4.25
-4.0
N.D.
-1.6
+0.5
+0.1
stress
R2A with Zinc chloride 2560 uM
-4.0
N.D.
-0.7
-0.1
+0.1
pH
R2A_PIPES pH 4.5
-3.0
N.D.
-1.9
+0.2
+0.4
no stress control
no stress control
-3.1
N.D.
-1.2
-0.1
+0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-2.3
N.D.
-1.4
-0.1
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-2.8
N.D.
-0.6
+0.1
+0.1
no stress control
no stress control
-2.1
N.D.
-0.9
-0.1
-0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-2.3
N.D.
-0.7
+0.0
+0.1
no stress control
no stress control
-1.8
N.D.
-1.0
+0.0
-0.1
stress
R2A with Zinc chloride 2560 uM
-2.5
N.D.
-0.4
+0.1
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-2.0
N.D.
-0.7
-0.1
-0.0
no stress control
no stress control
-2.0
N.D.
-0.6
+0.1
-0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-1.2
N.D.
-1.0
-0.0
-0.0
no stress control
no stress control
-1.2
N.D.
-0.8
-0.0
-0.2
no stress control
no stress control
-0.9
N.D.
-0.6
-0.1
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
-1.3
N.D.
-1.0
+0.2
+0.5
stress
R2A with Nickel (II) chloride 1696 uM
-1.2
N.D.
-0.4
+0.1
+0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-1.0
N.D.
-0.4
-0.3
+0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-1.0
N.D.
-0.7
-0.0
+0.2
no stress control
no stress control
-0.5
N.D.
-0.6
-0.1
+0.1
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