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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS08465 and LRK55_RS08470 are separated by 133 nucleotides
LRK55_RS08470 and LRK55_RS08475 are separated by 64 nucleotides
LRK55_RS08475 and LRK55_RS08480 are separated by 10 nucleotides
LRK55_RS08480 and LRK55_RS08485 are separated by 10 nucleotides
LRK55_RS08465: LRK55_RS08465 - ParB/RepB/Spo0J family partition protein, at 1,850,701 to 1,851,570
_RS08465
LRK55_RS08470: LRK55_RS08470 - glycosyltransferase, at 1,851,704 to 1,852,420
_RS08470
LRK55_RS08475: LRK55_RS08475 - DUF488 domain-containing protein, at 1,852,485 to 1,852,853
_RS08475
LRK55_RS08480: LRK55_RS08480 - patatin-like phospholipase family protein, at 1,852,864 to 1,853,799
_RS08480
LRK55_RS08485: LRK55_RS08485 - YafY family protein, at 1,853,810 to 1,854,793
_RS08485
Group
Condition
LRK55
_RS08465
LRK55
_RS08470
LRK55
_RS08475
LRK55
_RS08480
LRK55
_RS08485
no stress control
no stress control
N.D.
N.D.
-0.1
+0.0
-1.2
no stress control
no stress control
N.D.
N.D.
-0.1
+0.3
-1.3
no stress control
no stress control
N.D.
N.D.
-0.2
+0.2
-1.2
pH
R2A_PIPES pH 4.25
N.D.
N.D.
+0.4
-1.1
-0.2
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
-0.3
-0.2
-0.2
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
-0.2
-0.0
-0.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
-0.3
-0.0
-0.3
pH
R2A_PIPES pH 4.25
N.D.
N.D.
-0.6
-0.3
+0.3
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
+0.2
-0.3
-0.5
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
+0.0
+0.2
-0.8
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
+0.1
-0.5
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
+0.2
+0.4
-1.1
no stress control
no stress control
N.D.
N.D.
+0.0
+0.3
-0.8
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
-0.1
-0.0
-0.3
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
-0.3
+0.3
-0.4
no stress control
no stress control
N.D.
N.D.
-0.2
+0.1
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
-0.0
+0.3
-0.6
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
+0.3
+0.3
-0.7
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
+0.1
+0.2
-0.4
no stress control
no stress control
N.D.
N.D.
+0.2
+0.1
-0.4
no stress control
no stress control
N.D.
N.D.
+0.2
+0.2
-0.4
pH
R2A_PIPES pH 4.5
N.D.
N.D.
+0.3
+0.1
-0.3
pH
R2A_PIPES pH 4.5
N.D.
N.D.
+0.2
+0.3
-0.1
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