Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS08255 and LRK55_RS08260 are separated by 14 nucleotidesLRK55_RS08260 and LRK55_RS08265 are separated by 64 nucleotidesLRK55_RS08265 and LRK55_RS08270 are separated by 124 nucleotidesLRK55_RS08270 and LRK55_RS08275 are separated by 1 nucleotides LRK55_RS08255: LRK55_RS08255 - 50S ribosomal protein L34, at 1,808,562 to 1,808,696 _RS08255 LRK55_RS08260: LRK55_RS08260 - ribonuclease P protein component, at 1,808,711 to 1,809,115 _RS08260 LRK55_RS08265: LRK55_RS08265 - membrane protein insertase YidC, at 1,809,180 to 1,810,916 _RS08265 LRK55_RS08270: LRK55_RS08270 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE, at 1,811,041 to 1,812,384 _RS08270 LRK55_RS08275: LRK55_RS08275 - ribokinase, at 1,812,386 to 1,813,282 _RS08275
Group Condition LRK55_RS08255 LRK55_RS08260 LRK55_RS08265 LRK55_RS08270 LRK55_RS08275
stress R2A with Nickel (II) chloride 1696 uM N.D. N.D. N.D. -0.6 -0.7
no stress control no stress control N.D. N.D. N.D. -0.6 -0.6
no stress control no stress control N.D. N.D. N.D. -0.6 -0.4
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. N.D. N.D. -0.3 -0.6
stress R2A with Zinc chloride 2560 uM N.D. N.D. N.D. -0.8 -0.2
stress R2A_PIPES with Cadmium chloride 64 uM N.D. N.D. N.D. -0.5 -0.3
no stress control no stress control N.D. N.D. N.D. -0.6 -0.1
no stress control no stress control N.D. N.D. N.D. -0.7 -0.0
stress R2A with Zinc chloride 2560 uM N.D. N.D. N.D. -0.9 +0.3
pH R2A_PIPES pH 4.25 N.D. N.D. N.D. -0.9 +0.3
no stress control no stress control N.D. N.D. N.D. -0.2 -0.4
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. N.D. N.D. -0.4 -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. N.D. N.D. -0.4 -0.1
stress R2A_PIPES with Cadmium chloride 64 uM N.D. N.D. N.D. -0.5 +0.2
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. N.D. N.D. -0.1 -0.2
no stress control no stress control N.D. N.D. N.D. -0.4 +0.2
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. N.D. N.D. -0.1 -0.1
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. N.D. N.D. +0.2 -0.5
no stress control no stress control N.D. N.D. N.D. -0.0 -0.1
pH R2A_PIPES pH 4.25 N.D. N.D. N.D. -0.1 +0.0
pH R2A_PIPES pH 4.5 N.D. N.D. N.D. -0.1 +0.0
pH R2A_PIPES pH 4.5 N.D. N.D. N.D. +0.1 -0.1
stress R2A with Nickel (II) chloride 1696 uM N.D. N.D. N.D. -0.1 +0.2
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