Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS08180 and LRK55_RS08185 are separated by 221 nucleotidesLRK55_RS08185 and LRK55_RS08190 are separated by 97 nucleotidesLRK55_RS08190 and LRK55_RS08195 are separated by 123 nucleotidesLRK55_RS08195 and LRK55_RS08200 are separated by 88 nucleotides LRK55_RS08180: LRK55_RS08180 - carbohydrate porin, at 1,788,372 to 1,789,748 _RS08180 LRK55_RS08185: LRK55_RS08185 - acetate--CoA ligase, at 1,789,970 to 1,791,910 _RS08185 LRK55_RS08190: LRK55_RS08190 - response regulator transcription factor, at 1,792,008 to 1,792,682 _RS08190 LRK55_RS08195: LRK55_RS08195 - PAS domain-containing hybrid sensor histidine kinase/response regulator, at 1,792,806 to 1,796,294 _RS08195 LRK55_RS08200: LRK55_RS08200 - 4'-phosphopantetheinyl transferase superfamily protein, at 1,796,383 to 1,797,027 _RS08200
Group Condition LRK55_RS08180 LRK55_RS08185 LRK55_RS08190 LRK55_RS08195 LRK55_RS08200
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.2 +0.1 -0.1 +0.2 N.D.
no stress control no stress control +0.1 +0.1 -0.2 +0.1 N.D.
no stress control no stress control -0.1 +0.2 +0.1 +0.2 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.2 +0.2 +0.2 +0.1 N.D.
no stress control no stress control +0.0 +0.2 +0.0 +0.2 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.0 +0.1 -0.0 +0.3 N.D.
no stress control no stress control +0.1 +0.1 +0.1 +0.2 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.1 +0.2 +0.2 +0.2 N.D.
no stress control no stress control +0.0 +0.2 +0.2 +0.1 N.D.
no stress control no stress control +0.0 +0.1 +0.3 +0.1 N.D.
stress R2A with Nickel (II) chloride 1696 uM -0.2 +0.3 +0.2 +0.3 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.0 +0.2 +0.2 +0.2 N.D.
no stress control no stress control +0.1 +0.3 +0.2 +0.0 N.D.
stress R2A with Zinc chloride 2560 uM -0.1 +0.3 +0.1 +0.3 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.0 +0.3 +0.2 +0.2 N.D.
stress R2A with Nickel (II) chloride 1696 uM -0.1 +0.3 +0.3 +0.3 N.D.
pH R2A_PIPES pH 4.5 +0.1 +0.3 +0.2 +0.3 N.D.
pH R2A_PIPES pH 4.5 +0.1 +0.3 +0.3 +0.2 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM +0.4 +0.1 +0.0 +0.4 N.D.
stress R2A with Zinc chloride 2560 uM -0.1 +0.4 +0.5 +0.3 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM +0.3 +0.1 +0.3 +0.5 N.D.
pH R2A_PIPES pH 4.25 +0.4 +0.4 +0.7 +0.9 N.D.
pH R2A_PIPES pH 4.25 +0.1 +0.6 +1.0 +0.7 N.D.
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