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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS07820 and LRK55_RS07825 are separated by 238 nucleotides
LRK55_RS07825 and LRK55_RS07830 are separated by 13 nucleotides
LRK55_RS07830 and LRK55_RS07835 overlap by 4 nucleotides
LRK55_RS07835 and LRK55_RS07840 are separated by 5 nucleotides
LRK55_RS07820: LRK55_RS07820 - hypothetical protein, at 1,721,964 to 1,722,179
_RS07820
LRK55_RS07825: LRK55_RS07825 - sorbitol dehydrogenase family protein, at 1,722,418 to 1,722,948
_RS07825
LRK55_RS07830: LRK55_RS07830 - GMC family oxidoreductase, at 1,722,962 to 1,724,605
_RS07830
LRK55_RS07835: LRK55_RS07835 - cytochrome c, at 1,724,602 to 1,725,993
_RS07835
LRK55_RS07840: LRK55_RS07840 - carbohydrate porin, at 1,725,999 to 1,727,312
_RS07840
Group
Condition
LRK55
_RS07820
LRK55
_RS07825
LRK55
_RS07830
LRK55
_RS07835
LRK55
_RS07840
pH
R2A_PIPES pH 4.25
-0.7
-1.0
-0.2
+0.2
-0.4
pH
R2A_PIPES pH 4.5
-0.0
-0.8
-0.2
+0.1
+0.0
no stress control
no stress control
-0.4
-0.5
-0.0
+0.1
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
-0.3
-0.2
-0.3
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.8
+0.3
-0.1
-0.2
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
-0.3
-0.1
-0.5
+0.0
+0.2
pH
R2A_PIPES pH 4.5
-0.1
-0.3
-0.1
+0.1
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.3
-0.1
+0.1
-0.0
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.4
-0.1
+0.2
-0.1
-0.0
no stress control
no stress control
-0.2
-0.1
+0.1
-0.1
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.0
-0.2
-0.1
+0.0
-0.1
no stress control
no stress control
+0.1
-0.4
-0.0
+0.1
-0.0
no stress control
no stress control
-0.1
-0.2
+0.0
-0.0
+0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.1
-0.3
+0.1
+0.2
no stress control
no stress control
+0.1
-0.5
+0.1
+0.1
+0.1
stress
R2A with Zinc chloride 2560 uM
-0.0
+0.2
-0.2
+0.0
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
+0.1
+0.1
-0.0
-0.0
stress
R2A with Zinc chloride 2560 uM
+0.3
+0.1
-0.2
-0.0
+0.1
no stress control
no stress control
-0.1
+0.3
-0.1
-0.0
+0.2
no stress control
no stress control
-0.1
+0.4
-0.0
-0.0
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.2
+0.3
-0.0
-0.1
+0.1
pH
R2A_PIPES pH 4.25
+0.1
+0.0
+0.1
+0.2
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.3
+0.7
-0.0
+0.2
+0.2
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