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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS07755 and LRK55_RS07760 are separated by 38 nucleotides
LRK55_RS07760 and LRK55_RS07765 are separated by 52 nucleotides
LRK55_RS07765 and LRK55_RS07770 are separated by 275 nucleotides
LRK55_RS07770 and LRK55_RS07775 are separated by 225 nucleotides
LRK55_RS07755: LRK55_RS07755 - M20 family metallopeptidase, at 1,706,671 to 1,707,927
_RS07755
LRK55_RS07760: LRK55_RS07760 - amidohydrolase family protein, at 1,707,966 to 1,709,195
_RS07760
LRK55_RS07765: LRK55_RS07765 - 4,5-DOPA dioxygenase extradiol, at 1,709,248 to 1,710,027
_RS07765
LRK55_RS07770: LRK55_RS07770 - aldehyde dehydrogenase family protein, at 1,710,303 to 1,711,778
_RS07770
LRK55_RS07775: LRK55_RS07775 - NAD(P)-dependent oxidoreductase, at 1,712,004 to 1,712,615
_RS07775
Group
Condition
LRK55
_RS07755
LRK55
_RS07760
LRK55
_RS07765
LRK55
_RS07770
LRK55
_RS07775
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
-0.4
-0.2
-0.1
-0.3
stress
R2A with Zinc chloride 2560 uM
+0.1
+0.1
-0.1
+0.3
-0.7
pH
R2A_PIPES pH 4.25
-0.3
+0.3
-0.3
+0.2
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.2
+0.1
-0.2
+0.3
-0.6
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
-0.1
-0.1
+0.0
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.0
-0.1
+0.1
+0.3
-0.2
pH
R2A_PIPES pH 4.5
+0.2
-0.1
-0.1
+0.2
-0.0
no stress control
no stress control
+0.0
-0.2
-0.0
+0.4
+0.0
pH
R2A_PIPES pH 4.5
+0.2
+0.0
-0.1
+0.5
-0.4
no stress control
no stress control
+0.2
-0.2
+0.1
+0.2
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.1
+0.0
+0.0
+0.0
+0.1
no stress control
no stress control
+0.3
-0.2
+0.4
-0.2
+0.1
no stress control
no stress control
+0.2
-0.3
-0.0
-0.0
+0.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.3
+0.0
+0.1
+0.4
-0.3
no stress control
no stress control
+0.3
-0.2
+0.1
+0.2
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.3
-0.0
+0.3
+0.0
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
+0.3
+0.1
-0.0
+0.5
-0.2
stress
R2A with Zinc chloride 2560 uM
+0.2
+0.0
+0.1
+0.7
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.3
+0.3
-0.1
+0.1
+0.3
pH
R2A_PIPES pH 4.25
-0.4
+0.4
+0.1
+0.8
+0.3
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.2
+0.1
+0.1
+0.0
+0.9
no stress control
no stress control
+0.2
+0.1
+0.1
+0.6
+0.5
no stress control
no stress control
+0.5
-0.2
+0.2
+0.3
+0.9
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